Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2081 ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTAGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAAAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCGGCTGTTGCAGCCGCTCAGGCTGCGGCGGAGGTAGTTCGGCTCACTACCATCCCTCGATACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCGAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAACTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTACTTCTGCAAACAATGAATGGAATGACAGTACCAAATCAAAGGAGCAAATTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGAGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGATCGTGGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTATGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCAACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCACCGGCGACTCCTACGAAGGCGCATTCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCGGCTGGGGCGGAGACGCTGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGAGGTACCGGCGACACAGCATCGCTGGATCATCGGTGAGGGATGATGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCCAGGGCTAGGTCCCGGTTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGCGTTTCCGGAGAAGGGACCGGCGAGTATCGGCGCAAAGAAACGGCTGTCGTTCCCCGCCTCGCCGGCGAATTCGAGGAGGCACTCTGGTCCGCCGAAAATAGACGCTAGTCCGATCAAGAATGTTGCAGAGAGAGATTTTACCGGCGGGAGCAGATAG 1458 50.96 MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGIGWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAAFPEKGPASIGAKKRLSFPASPANSRRHSGPPKIDASPIKNVAERDFTGGSR 485
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 35375784 35378967 - CaPI482276_09g020810.1 Cam09g2081 136410
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2081 485 MobiDBLite consensus disorder prediction 324 351 - -
Cam09g2081 485 MobiDBLite consensus disorder prediction 395 411 - -
Cam09g2081 485 Coils Coil 177 197 - -
Cam09g2081 485 PANTHER IQ-DOMAIN 5-RELATED 6 438 - -
Cam09g2081 485 SMART iq_5 113 135 IPR000048 GO:0005515(InterPro)
Cam09g2081 485 ProSiteProfiles IQ motif profile. 114 142 - -
Cam09g2081 485 MobiDBLite consensus disorder prediction 377 394 - -
Cam09g2081 485 MobiDBLite consensus disorder prediction 1 35 - -
Cam09g2081 485 Gene3D iswi atpase 111 149 - -
Cam09g2081 485 MobiDBLite consensus disorder prediction 320 485 - -
Cam09g2081 485 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0039 Cam-Chr1:770328 Cam09g2081 Cam-Chr9:35375784 1.50E-26 dispersed
Cam03g1240 Cam-Chr3:24925706 Cam09g2081 Cam-Chr9:35375784 3.00E-33 dispersed
Cam04g0841 Cam-Chr4:22637438 Cam09g2081 Cam-Chr9:35375784 1.30E-106 dispersed
Cam05g0021 Cam-Chr5:711456 Cam09g2081 Cam-Chr9:35375784 1.00E-29 dispersed
Cam05g1064 Cam-Chr5:9742873 Cam09g2081 Cam-Chr9:35375784 1.70E-20 dispersed
Cam05g1966 Cam-Chr5:28517486 Cam09g2081 Cam-Chr9:35375784 2.30E-29 dispersed
Cam05g2284 Cam-Chr5:30951492 Cam09g2081 Cam-Chr9:35375784 1.20E-116 dispersed
Cam06g0111 Cam-Chr6:3076655 Cam09g2081 Cam-Chr9:35375784 4.40E-26 dispersed
Cam06g0278 Cam-Chr6:4720957 Cam09g2081 Cam-Chr9:35375784 3.40E-29 dispersed
Cam06g0643 Cam-Chr6:8653731 Cam09g2081 Cam-Chr9:35375784 6.80E-16 dispersed
Cam07g1020 Cam-Chr7:24513221 Cam09g2081 Cam-Chr9:35375784 1.50E-25 dispersed
Cam07g1539 Cam-Chr7:30038013 Cam09g2081 Cam-Chr9:35375784 4.30E-22 dispersed
Cam09g0023 Cam-Chr9:1193365 Cam09g2081 Cam-Chr9:35375784 6.80E-10 dispersed
Cam09g0070 Cam-Chr9:1566597 Cam09g2081 Cam-Chr9:35375784 1.20E-21 dispersed
Cam01g0768 Cam-Chr1:8565639 Cam09g2081 Cam-Chr9:35375784 7.70E-28 transposed
Cam01g2409 Cam-Chr1:36014360 Cam09g2081 Cam-Chr9:35375784 1.20E-33 transposed
Cam02g0258 Cam-Chr2:3431822 Cam09g2081 Cam-Chr9:35375784 1.30E-13 transposed
Cam10g1543 Cam-Chr10:29106640 Cam09g2081 Cam-Chr9:35375784 2.80E-20 transposed
Cam10g2014 Cam-Chr10:33989639 Cam09g2081 Cam-Chr9:35375784 1.70E-74 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2081 - - - 0.0