Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam09g2081 | ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTAGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAAAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCGGCTGTTGCAGCCGCTCAGGCTGCGGCGGAGGTAGTTCGGCTCACTACCATCCCTCGATACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCGAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAACTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTACTTCTGCAAACAATGAATGGAATGACAGTACCAAATCAAAGGAGCAAATTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGAGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGATCGTGGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTATGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCAACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCACCGGCGACTCCTACGAAGGCGCATTCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCGGCTGGGGCGGAGACGCTGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGAGGTACCGGCGACACAGCATCGCTGGATCATCGGTGAGGGATGATGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCCAGGGCTAGGTCCCGGTTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGCGTTTCCGGAGAAGGGACCGGCGAGTATCGGCGCAAAGAAACGGCTGTCGTTCCCCGCCTCGCCGGCGAATTCGAGGAGGCACTCTGGTCCGCCGAAAATAGACGCTAGTCCGATCAAGAATGTTGCAGAGAGAGATTTTACCGGCGGGAGCAGATAG | 1458 | 50.96 | MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGIGWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAAFPEKGPASIGAKKRLSFPASPANSRRHSGPPKIDASPIKNVAERDFTGGSR | 485 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 35375784 | 35378967 | - | CaPI482276_09g020810.1 | Cam09g2081 | 136410 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam09g2081 | 485 | MobiDBLite | consensus disorder prediction | 324 | 351 | - | - | |
| Cam09g2081 | 485 | MobiDBLite | consensus disorder prediction | 395 | 411 | - | - | |
| Cam09g2081 | 485 | Coils | Coil | 177 | 197 | - | - | |
| Cam09g2081 | 485 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 438 | - | - | |
| Cam09g2081 | 485 | SMART | iq_5 | 113 | 135 | IPR000048 | GO:0005515(InterPro) | |
| Cam09g2081 | 485 | ProSiteProfiles | IQ motif profile. | 114 | 142 | - | - | |
| Cam09g2081 | 485 | MobiDBLite | consensus disorder prediction | 377 | 394 | - | - | |
| Cam09g2081 | 485 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Cam09g2081 | 485 | Gene3D | iswi atpase | 111 | 149 | - | - | |
| Cam09g2081 | 485 | MobiDBLite | consensus disorder prediction | 320 | 485 | - | - | |
| Cam09g2081 | 485 | Pfam | IQ calmodulin-binding motif | 117 | 135 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g0039 | Cam-Chr1:770328 | Cam09g2081 | Cam-Chr9:35375784 | 1.50E-26 | dispersed | |
| Cam03g1240 | Cam-Chr3:24925706 | Cam09g2081 | Cam-Chr9:35375784 | 3.00E-33 | dispersed | |
| Cam04g0841 | Cam-Chr4:22637438 | Cam09g2081 | Cam-Chr9:35375784 | 1.30E-106 | dispersed | |
| Cam05g0021 | Cam-Chr5:711456 | Cam09g2081 | Cam-Chr9:35375784 | 1.00E-29 | dispersed | |
| Cam05g1064 | Cam-Chr5:9742873 | Cam09g2081 | Cam-Chr9:35375784 | 1.70E-20 | dispersed | |
| Cam05g1966 | Cam-Chr5:28517486 | Cam09g2081 | Cam-Chr9:35375784 | 2.30E-29 | dispersed | |
| Cam05g2284 | Cam-Chr5:30951492 | Cam09g2081 | Cam-Chr9:35375784 | 1.20E-116 | dispersed | |
| Cam06g0111 | Cam-Chr6:3076655 | Cam09g2081 | Cam-Chr9:35375784 | 4.40E-26 | dispersed | |
| Cam06g0278 | Cam-Chr6:4720957 | Cam09g2081 | Cam-Chr9:35375784 | 3.40E-29 | dispersed | |
| Cam06g0643 | Cam-Chr6:8653731 | Cam09g2081 | Cam-Chr9:35375784 | 6.80E-16 | dispersed | |
| Cam07g1020 | Cam-Chr7:24513221 | Cam09g2081 | Cam-Chr9:35375784 | 1.50E-25 | dispersed | |
| Cam07g1539 | Cam-Chr7:30038013 | Cam09g2081 | Cam-Chr9:35375784 | 4.30E-22 | dispersed | |
| Cam09g0023 | Cam-Chr9:1193365 | Cam09g2081 | Cam-Chr9:35375784 | 6.80E-10 | dispersed | |
| Cam09g0070 | Cam-Chr9:1566597 | Cam09g2081 | Cam-Chr9:35375784 | 1.20E-21 | dispersed | |
| Cam01g0768 | Cam-Chr1:8565639 | Cam09g2081 | Cam-Chr9:35375784 | 7.70E-28 | transposed | |
| Cam01g2409 | Cam-Chr1:36014360 | Cam09g2081 | Cam-Chr9:35375784 | 1.20E-33 | transposed | |
| Cam02g0258 | Cam-Chr2:3431822 | Cam09g2081 | Cam-Chr9:35375784 | 1.30E-13 | transposed | |
| Cam10g1543 | Cam-Chr10:29106640 | Cam09g2081 | Cam-Chr9:35375784 | 2.80E-20 | transposed | |
| Cam10g2014 | Cam-Chr10:33989639 | Cam09g2081 | Cam-Chr9:35375784 | 1.70E-74 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam09g2081 | - | - | - | 0.0 |