Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2098 ATGGCTTCCAACACTTTGATGAGCTGTGGCATTGCCACCACCGCCTTCCCTTCAGTCCTTTCCTCCTCTAAGTCTAAATTCGCCGCCGCTGTCCCGATTTCTGGCGTCGCCGTCAATGCATCATCCCGATTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCTCCCTACCTCGACGGCTCCGCCCCCGGTGATTTTGGGTTCGACCCTCTTCGGCTGGGAGAAGTGCCGGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTGAAAGCTCAAGAATGGGCAGCAATTCCAGGAGGCCAAGCTACATACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCAGGAGGTGCTTTTGACCCATTAGGCTACTCAAGAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCACTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATTATCATCCCCAGATCGATTTCGCCTTGA 741 53.04 MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35536908 35538507 + CaPI482276_09g020980.1 Cam09g2098 136427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2098 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Cam09g2098 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Cam09g2098 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
Cam09g2098 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 235 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cam09g2098 246 FunFam Chlorophyll a-b binding protein, chloroplastic 51 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2098 Cam-Chr9:35536908 Cam11g1395 Cam-Chr11:26609014 6.30E-37 dispersed
Cam09g2098 Cam-Chr9:35536908 Cam06g1755 Cam-Chr6:28793862 1.00E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2098 K08907 - csv:101211428 498.434