Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2099 ATGTCTTCATCGCTCTGTTCCTCAATTCGGCCATTGCCACCGCACTACTGGCGGCGGAAGAACTTCAGATTCTTCCTATTGCTTCAATCAAACAGATGCATTTGCTTCGCACCTCGCTTCGTTGCTTGCTCGAACAACGACGACTCTGTTGCAATACCCAGACCTACGCCGCTGGCTTTCGATCCTGCGGAGGATCTGTACGGACTTGGCATCGATTTAAAACCTAGGTATGTAGCTTCTAGGGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGTTACCATGTCCAAGTTGCCGAGGTAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGATTGTTCCGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTCTGGGGGATCGTGTCATATGGGAAGAGTCTATTGATGAACGACCATGGGAGAAAGCACGCTCCACTTCTCCGTTAAGAATGAAGGAAGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGTGTTTACCAATCCCCTCCTCCTGAAGTTGGTTTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCTAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTTAACGATCCAGAAAACCGTCGAAAGCGGAGCATTGCAATGAAAGGAGTAAAATTTTACTGCAAAAACTGCGGCCGTGAAGGACATCGAAGACACTATTGTCCAGAACTTAAGGAAGCAATTGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACCGGAGGACTTGTGAGAAGTCTAGGTCGAATAGTATACCGATGACCGCAACAATACAGCGCCATTGCGGGATATGCGGTGTGAAGGGCCACAACAGGAGGAACTGTCAGAAGTCCAAGTTGAGCAATCCAACTAACCTACGAATAAATTATGCACATCGTCGGAGCAGTCGCAATGTGTTGAGGCTGAATTTGATCAGTGAAAATAGCAGAGTGAGGCAGTATCATTGTAGGATCTGCAATAAAAACGGTCACAGTCAGCAGAACTGTCCCAATATTGATAGGGAAGGTTCAAATCCTAGTAGCCCATCCTTATTTATCTATTGTATTGGTGATATATATAACTACATTGCTGCTGCTGCTGTACTGTAA 1299 45.03 MSSSLCSSIRPLPPHYWRRKNFRFFLLLQSNRCICFAPRFVACSNNDDSVAIPRPTPLAFDPAEDLYGLGIDLKPRYVASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKGVKFYCKNCGREGHRRHYCPELKEAIDRRFRCRVCGEKGHNRRTCEKSRSNSIPMTATIQRHCGICGVKGHNRRNCQKSKLSNPTNLRINYAHRRSSRNVLRLNLISENSRVRQYHCRICNKNGHSQQNCPNIDREGSNPSSPSLFIYCIGDIYNYIAAAAVL 432
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 35541781 35550725 + CaPI482276_09g020990.1 Cam09g2099 136428
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2099 432 ProSiteProfiles Zinc finger CCHC-type profile. 386 401 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 SMART c2hcfinal6 331 347 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 SMART c2hcfinal6 274 290 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 SMART c2hcfinal6 300 316 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 SMART c2hcfinal6 385 401 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 93 399 IPR051714 GO:0003727(PANTHER)|GO:0003729(PANTHER)|GO:0005737(PANTHER)|GO:0045182(PANTHER)|GO:2000767(PANTHER)
Cam09g2099 432 SUPERFAMILY Retrovirus zinc finger-like domains 378 406 IPR036875 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 ProSiteProfiles Zinc finger CCHC-type profile. 275 290 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 Coils Coil 164 184 - -
Cam09g2099 432 SUPERFAMILY Retrovirus zinc finger-like domains 272 318 IPR036875 GO:0003676(InterPro)|GO:0008270(InterPro)
Cam09g2099 432 Gene3D - 325 412 - -
Cam09g2099 432 Gene3D - 272 323 - -
Cam09g2099 432 ProSiteProfiles Zinc finger CCHC-type profile. 300 316 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2099 - - - 0.0