Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2125 ATGTTGCTTTCTTCTCCGCCGCTTCTTGCAGGGATTGAATCTCAACCAAAGGCCGTACAGGATTGGAACTACAATAGAGTAATGGCGTCTTCAGATGATGAGGCTGAGACCTTGCCTCTATCTGTCTCAAATTATCACTTCGTGGATCACAAGGAAGAGCCTATTTCATTCTCTATTTTGCCGATTCAATGGGATGAAGGGGAGAGGTTGGAGGGCAGTCAAGAACCTGTTTTCCTGCATGGAACAGCCGATGATGGACTTCAAAAGGTTTATAAACAGGTTACTGCATGGAGGTTTGATATTTGCGGTTCAAAGCCAGAGATATCGGTGCTTTCCAAAGAAAATGTGTGGATTAAGCTTCAGAAGCCTAGAAAGAGCTTTGAGGATACCATTAGAACCATCTTGATCACAGTACAATGCCTTCATGCATTGAAGAGGAATCCAGATACATCTAGCAAATCTTTGTGGGATCTATTAGCCAAAATCTTCAGCTTGTATGAAGTGAGGCCTTCACAGAATGATTTGGTGGATCACATGCCTCTAATCAGTGAAGCAGTTAAAAGGGATGATATATTGTCCAAGTCCCAGTTCTTACGTGCATTCCTTGAAGAGAAGCCTGTTAAGAGAATGTCATGTCATGAGGATGCTGAACATAATGTGCAGCCTAGTTTTATAGTTGATGATTCAGATGATGAAGACATGGTTGATGACGCTGTTGAAGAGGAGAGTGATGATGATGTCTTTGATTCTGTCTGTGCATTTTGTGATAATGGTGGCAACATTATATGCTGTGATGGGAGGTGCATGAGGTCCTTTCATGCAACTCAAGAGGATGGTGATTGTTTCTCGCTTGGTCTCTCTAGAGAAGAAGTTGATGCAATTGAAACCTTTATTTGCAAGAATTGCGAGTATAAACAGCACCAGTGTTATGCTTGTGGGAATTTAGGTTCATCTGATCAGTCTTCTGGTGCTGAGGTCTTCCAATGTGTAAATGCAACTTGTGGTTATTTTTATCATCCTAAATGTATTTCAAAATTGCTTCATCGGGAGAATAAAGTTGCTGCTGGAGAACTTGAGAAGAAGATTGCTTCTGGAGAATCTTTCTCATGCCCTGTGCATAAGTGCTCTGTTTGTGCACTCGGCGAAAATAAAAAAGTATGGGAATTACAGTTTGCTGTTTGCCGACGTTGTCCTAAATCATATCATAGAAAATGCTTACCAAGGAAGATCACTTTTGAAGGTTCAGAGGATGGTGAAACCCCAACCAGGGCATGGGAAAAGCTATTACCTAATCGCATATTGATATATTGCTTAGACCATGATATCGATGAAGAACTTGAGACTCCAGCAAGAGACCATATCAAATTCCCTGGTCTTGAAGAGAGTAAGATTCCTATTCAGAAAAAGAAACTTCCTACAGATGATACAAGACAAGGGAAGACAATAGGCTTTTGTGGGAGTAGGGAGAATGTTGTATCAAACAAGGGAAATATGTCAGATGACCTTCAGGGAAAATCTGCTGCAAAAGTATCCAAATCATTTGAGAGGTCCTCATCTGATGGAAAGGTTCTTGGCAAAGTGACTGAGAAATCATTGTTGGGCTCTGAGTCCAGAAAAGTGAAATTGCTTGGTAATGTTTCAAGAAAGTCTTTGAATCAAAATGGAGAATCTGTCCTCATGGACAATGATAAAACTATGAAGTTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATGCCAATCAAGAGATCTGATCAAAATAAGGCTCCTAAGGAGGATCGTATTGAACCAGGAAAGTCTGAGGCTTCTAAGCCTCTGACAAAGAAGTCGAACAGTGGGATAATCCAATTAGATGCTGAGTCGGAGAGGAGGTTAACGGATTTGATGAAAGATGCTGCATCTTCAATTACTTTGGAGAACGTAATTCAGAAGCACAAAGTTCCATCTACTCATGCATATTCTTTAAAACATGTAGTTGACAAGACAATTAAGATGGGGAAGTTGGAAGGCTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGAGGAAGGATGTTGCATTGAAGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAATCACATATTTAAGTGGAAGATTGTTGATAGGCTTCATTGGTACATAGAGAAAGGCGATACAATAGTGGACTTCTGCTGCGGTGCAAATGATTTTAGTGTTTTGATGAAGAAAAAACTTGATGAGACGGGTAAACGATGCTCGTATAGAAACTTTGACTTTATTCCACCGAAGAACGATTTCAATTTTGAAAAAAGGGATTGGATGACTGTGCAACCAAAGGAATTGCCTAAAGGATCGCAATTGATCATGGGACTAAATCCTCCATTTGGAGTTAAGGCTGCTTTGGCAAACAAATTCATCGACAAAGCTCTTGAGTTTAATCCAAAGCTCCTTATTCTTATTGTTCCTCCTGAAACAGAGAGGCTGGATAGAAAAAAGACTCCTTATGACCTGATTTGGGAGGATAATAAGTTTTTGTCAGGAAAGTCATTTTATCTTCCTGGATCTGTCAATGCAAAGGACAAGCAGATGGATCAGTGGAATGTCCGGCCACCCGTGCTCTATTTGTGGAGTCATCGTGATTGGTCTGATAAACACATAGCCATAGCCCAAAAACATGAGCATCTCTGGCCAAAGAAACAAGAGGAATCAGAAAAAGGGAAGACTTCTGATACTTTAAGGGTGAGGCAACCAGAGGAGTCTGAAAAGGGAAAGAATTCTGATTTGTCGAGGCATAGGCAACAAGAGGATTCAGGAATGGAAAAAGGATCCGAGACGTTGAGGCCTAAGCAATTGGAATCAGAAAAAGGCCAAAGCTCTAAAACTTCGGCTGATCATATTCATTTCAATGATACATTACTGATGACAGAATCTACAATACTAGCAGCAGATGAACCAGAAGATTCCAAGAGCGGATCAGTTGTCTGTGAAGTTGATAAAAATGGGTCCACAAAAACATCTTCGAAGAGGGATAGTGACAGAGAGAGTCATGACAGTCGGGACGTCCGTCCTAATCTGTCTCCTGAGGCTCCAAGGAAGAAGAGGCAGCGGTTTGAAGAAATACCTAGAAGAGGCGATGGTGAGCCATCAGAAGAGAGCAGACGTGATAGTAAAAGGCCTTCTTTAAATGAGATTAATCAGAGATCTCATGCTTCTCCAAATGTGAGTGATCATATGTCCTATAAGGCTGTTGAGAAGCCTTCATATGCTGATGCGGGAGGGATAGGACATCAGGAGCCGGGGTCGACTATGCCTGACCCGAATTCCAACTTTGGAGCTCCTTATGATGCAGCACGAGCTAGCTTAACCGATGACATTGCCAGAAAGTACAACATCAATGCTGAGGAGGCTTATTCAATTGGGACTACTGGATGGTCAAACAATGCAAGTTCCATGTATGATATTGGTTCTAGACACATTGAGGAACGTAACGTCGATCTAATGGGAGGACATGCTGATGGCCTTAACTATAAACCCTACTCTACTGGGCTTGACACGTACATGAGGGACTCTGAAATACGGTCACGTGTTCGTCATTACGGGCACCCAGATACCGACAATTTAAGAAGCAATTACCAAGCTGGAGTTGATCCTAGGTATAGCAGGATTGGGGCATTCCCAGCTGCTTATGGGCATTTGGGTACATATCCTGAACCATCCCACTGGATGAACACTTCAGCAACACAACGATACGTGCCTCGACTCGATGAGTTGAACCACACTAGATTGGGGGGAATGGGTGGTGGGCATCGGATGAATGGCAGCAATGCTTTCGACCCTAGAGCACACCTACCCTCTGGTTTCAGGGGTGCGCCACAGGGGTTTGCATCTGGTCCTCGATACCCGTCTTCAAACCAGAATTCAGCGGGTTGGCTTAATGAGTAG 3927 42.63 MLLSSPPLLAGIESQPKAVQDWNYNRVMASSDDEAETLPLSVSNYHFVDHKEEPISFSILPIQWDEGERLEGSQEPVFLHGTADDGLQKVYKQVTAWRFDICGSKPEISVLSKENVWIKLQKPRKSFEDTIRTILITVQCLHALKRNPDTSSKSLWDLLAKIFSLYEVRPSQNDLVDHMPLISEAVKRDDILSKSQFLRAFLEEKPVKRMSCHEDAEHNVQPSFIVDDSDDEDMVDDAVEEESDDDVFDSVCAFCDNGGNIICCDGRCMRSFHATQEDGDCFSLGLSREEVDAIETFICKNCEYKQHQCYACGNLGSSDQSSGAEVFQCVNATCGYFYHPKCISKLLHRENKVAAGELEKKIASGESFSCPVHKCSVCALGENKKVWELQFAVCRRCPKSYHRKCLPRKITFEGSEDGETPTRAWEKLLPNRILIYCLDHDIDEELETPARDHIKFPGLEESKIPIQKKKLPTDDTRQGKTIGFCGSRENVVSNKGNMSDDLQGKSAAKVSKSFERSSSDGKVLGKVTEKSLLGSESRKVKLLGNVSRKSLNQNGESVLMDNDKTMKLKKSSLVGKSAMPIKRSDQNKAPKEDRIEPGKSEASKPLTKKSNSGIIQLDAESERRLTDLMKDAASSITLENVIQKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLEEGCCIEDAEAVCEPEVLNHIFKWKIVDRLHWYIEKGDTIVDFCCGANDFSVLMKKKLDETGKRCSYRNFDFIPPKNDFNFEKRDWMTVQPKELPKGSQLIMGLNPPFGVKAALANKFIDKALEFNPKLLILIVPPETERLDRKKTPYDLIWEDNKFLSGKSFYLPGSVNAKDKQMDQWNVRPPVLYLWSHRDWSDKHIAIAQKHEHLWPKKQEESEKGKTSDTLRVRQPEESEKGKNSDLSRHRQQEDSGMEKGSETLRPKQLESEKGQSSKTSADHIHFNDTLLMTESTILAADEPEDSKSGSVVCEVDKNGSTKTSSKRDSDRESHDSRDVRPNLSPEAPRKKRQRFEEIPRRGDGEPSEESRRDSKRPSLNEINQRSHASPNVSDHMSYKAVEKPSYADAGGIGHQEPGSTMPDPNSNFGAPYDAARASLTDDIARKYNINAEEAYSIGTTGWSNNASSMYDIGSRHIEERNVDLMGGHADGLNYKPYSTGLDTYMRDSEIRSRVRHYGHPDTDNLRSNYQAGVDPRYSRIGAFPAAYGHLGTYPEPSHWMNTSATQRYVPRLDELNHTRLGGMGGGHRMNGSNAFDPRAHLPSGFRGAPQGFASGPRYPSSNQNSAGWLNE 1308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35795702 35816985 - CaPI482276_09g021250.1 Cam09g2125 136454

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2125 1308 MobiDBLite consensus disorder prediction 585 603 - -
Cam09g2125 1308 SUPERFAMILY FYVE/PHD zinc finger 241 306 IPR011011 -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 574 610 - -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 978 1072 - -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 1267 1308 - -
Cam09g2125 1308 Pfam Cytosine specific DNA methyltransferase replication foci domain 42 163 IPR022702 -
Cam09g2125 1308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 396 IPR013083 -
Cam09g2125 1308 Pfam Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 305 373 - -
Cam09g2125 1308 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 28 1300 - -
Cam09g2125 1308 SMART PHD_3 308 374 IPR001965 -
Cam09g2125 1308 SMART PHD_3 375 441 IPR001965 -
Cam09g2125 1308 SMART PHD_3 251 303 IPR001965 -
Cam09g2125 1308 CDD PHD2_NSD 308 373 - -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 997 1057 - -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 1292 1308 - -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 892 961 - -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 892 956 - -
Cam09g2125 1308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 305 IPR013083 -
Cam09g2125 1308 MobiDBLite consensus disorder prediction 1084 1109 - -
Cam09g2125 1308 CDD PHD3_NSD 375 407 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2125 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g591 Blo03g00537 . Bda07g00383 . . . . . . . Cma01g01105 . Car01g00978 . . . Cpe02g00796 Bhi09g01710 . . . . . . . . . . . . . . . Cone14ag1189 Cone15ag1208 Lsi02g01869 Csa07g00996 . . . . . . Bpe11g00561 . . . . Cmo01g01151 . . . . . . . . . . . . . . Cla09g02036 Cam09g2125 Cec09g2190 . . . . . . Chy01g01070 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003000 1 4 2 0 1 1 1 1 1 1 1 1 1 0 1 1 1 3 1 1 10 1 1 1 1 1 1 3 1 2 46