Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2130 ATGAAGCTTTCTTCCTCCGATCAACAGCTGTGGATTTGCCGGAGGAGGCGCCCTGAAGTTCGCCTGAGCTCCGATGAGTTGCTGGAAGAGTTTTCCGGCAATGTGTTCTCTCCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTCCCTGGTGCTGGAAATGCTCCATTTGTTGTGGCTCGCGGTGGATTTTCAGGGCTTTTTCCTGATTCATGTGGAGTCGCCTACAATTTTGCAGTTATGGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACCAAAGATGGAGTTGGAATTTGTCTTCCGGATCTGAGGCTTGACAATGCTACTGATGCTCCGACTATTCTAGGGACAAACCGCAGCAATGTCTATCTTGTTAATGGTGTCCGTACTAAGGGATTGTTTACGGTCGATTTCAATTTCAAAGAACTGGAAAATGTTTCTCTTGTTCAAGGTATCTATTCTCGAACTAATAAGTTCGATGGCAATGAGTTTGTTATTCTCACTCCTGAAGATGTGGTTAATCAGTTCAAGCCTCCAGGATTTTGGCTAAATATTCAGCATGATGTGTTCTTCACGCAACATAACGTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGAAGCATCATTGTTAACTATATATCATCACCAGAGGTCGGATTTCTCAGAAGTATAGCTGCAAGGGTTCCCCGCACAACAAAGTTGATCCTTCGGGTCTTAGGACCCACTGATACTGAGGTTACCACCAACCAGACATATGCCTCTCTCTTAGGAAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATATGGCCCATTAGTAACGATGGTTACATACAACCTCAAACCTCTCTTGTTTCTGATGCTCACAAAGCACAGCTGGAAATTTTTGCATCAGACTTCTTTAGTGACCTTCCATTAAGCTACAATTACAGTTACGATCCCGTTACTGAATACCTGTCTTACTTTGACAATGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCCATTTCTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGATAAGAACGCCAAAAGTCAAGCCAAGCCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGCTTGCACAGATTTGGCATACTCGAATGCCATTTCAGATGGTGTTGAAGTACTCGACTGTCCTGTTCAAATAACAAAAGACGGGATACCATTTTGCATGAGCTCAATTAATCTCATCGACAGCACAACAATATCTCAATCACCATTCATTAACCGTTCAAAAAAAATTCCCGAAATTAGTCCTAACGAAGGAATTTTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTAACCCCGTCAATATTGAACCCTTATTCGAAGTTCACGTTGTTCCGAAATCCAAGGTTCAGAAACAGTGGAAAATTCATAACACTACCTGATTTCTTGGCCTTCGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCATATTGAGCATGCAGCCTACCTTGCTAAGGATCAGGGTTTAAGTGTAACTGATGCGGTCTTTAGTTCCTTAAGCAAAGCTGGTTATGATAATCAGACAGCCCTTAAAGTATTGATTCAATCTCCAGATAGTGCTGTTCTAAAAAAATTTAAACAGGAAAATAACAGTTACGAGCTTGTTTATCAAGTTGACATGTCAATTGGGGATGTGCTCAATACAACTGTTGTGGACATAAAGAGTTTTGCCAACTCTGTGACTATCAGCAAGCCCTCTGTCTTCCCTGAAAATCAGCTATTTCTCACGGGATCTACAGATGTTGTGAAGAAGCTGCAAGCACTTAAGCTCTCTGTATATGTGGAAACCTTCGACAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCCGATGCAACCGTAGAGATCAACTCATATGTTTTGGGAGCCAACATTGATGGAGTCATCACCAGCTTCCCAAAGACATCTGCTAGATATAAAAAGAACCGATGTTTAACAATGAAAGAAACACCTAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGTTGCAACTTGTTACTCCAGACTACCTGCCTCCGAAGACAGCTCCGAGCCCGGTTTTGAATGACAAAGACGTAGCTGAGCCACCATTGCCTCCGGTTTCGGCCAAAGCCCCAGCACCTGCTGTGGACAGTGGCCCTACAGCAGCATCTCCAACTTCTAAACCCAATGGACAACCTAAGCTTGGAGCTGGAGCAGGCTTCTTGTTCTTGAACCTTGCCATACTTTCCATTGCTCTTCTTCCATTCTGA 2331 42.64 MKLSSSDQQLWICRRRRPEVRLSSDELLEEFSGNVFSPSSVSSVSSLVPGAGNAPFVVARGGFSGLFPDSCGVAYNFAVMVSVPDVILWCDVQLTKDGVGICLPDLRLDNATDAPTILGTNRSNVYLVNGVRTKGLFTVDFNFKELENVSLVQGIYSRTNKFDGNEFVILTPEDVVNQFKPPGFWLNIQHDVFFTQHNVSMRNFVLSVSRSIIVNYISSPEVGFLRSIAARVPRTTKLILRVLGPTDTEVTTNQTYASLLGNLTFIKTFASGILVPKTYIWPISNDGYIQPQTSLVSDAHKAQLEIFASDFFSDLPLSYNYSYDPVTEYLSYFDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPACTDLAYSNAISDGVEVLDCPVQITKDGIPFCMSSINLIDSTTISQSPFINRSKKIPEISPNEGIFAFDLTWEEIQGLTPSILNPYSKFTLFRNPRFRNSGKFITLPDFLAFAKNASTLSGVLIHIEHAAYLAKDQGLSVTDAVFSSLSKAGYDNQTALKVLIQSPDSAVLKKFKQENNSYELVYQVDMSIGDVLNTTVVDIKSFANSVTISKPSVFPENQLFLTGSTDVVKKLQALKLSVYVETFDNEFVSQAWDFFSDATVEINSYVLGANIDGVITSFPKTSARYKKNRCLTMKETPNYMSPVQPGSLLQLVTPDYLPPKTAPSPVLNDKDVAEPPLPPVSAKAPAPAVDSGPTAASPTSKPNGQPKLGAGAGFLFLNLAILSIALLPF 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35858212 35868000 + CaPI482276_09g021300.1 Cam09g2130 136459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2130 776 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 53 354 - -
Cam09g2130 776 ProSiteProfiles GP-PDE domain profile. 55 355 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 Pfam Glycerophosphoryl diester phosphodiesterase family 378 667 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 Pfam Glycerophosphoryl diester phosphodiesterase family 90 308 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 SUPERFAMILY PLC-like phosphodiesterases 54 349 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 ProSiteProfiles GP-PDE domain profile. 371 673 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 52 737 - GO:0008889(PANTHER)
Cam09g2130 776 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 369 673 - -
Cam09g2130 776 MobiDBLite consensus disorder prediction 710 751 - -
Cam09g2130 776 SUPERFAMILY PLC-like phosphodiesterases 370 672 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 CDD GDPD_SHV3_repeat_1 55 354 - -
Cam09g2130 776 Gene3D Phosphatidylinositol (PI) phosphodiesterase 53 351 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 Gene3D Phosphatidylinositol (PI) phosphodiesterase 369 672 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cam09g2130 776 CDD GDPD_SHV3_repeat_2 371 672 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1975 Cam-Chr1:33039869 Cam09g2130 Cam-Chr9:35858212 4.40E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2130 - - - 0.0