Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2131 ATGCCTGAGAAAGAGAGCCACAATGTTGTTACAGAGCCTCGTTTGGTAGCTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATACTTTGACCCTTTTCTAGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCAGATCATCCACATAGAGGATTTGAGACAGTGACATATATGCTGCAGGGAAGTGTGACACATGAAGATTTTGAAGGGCACAAGGGAACAATAGGAGCAGGTGACTTGCAATGGATGACTGCAGGTAGAGGAATTGTACATTCAGAAATGCCTGCAGCCCAAGGGACCCAAAAGGGCCTCCAACTATGGATCAACCTCTCTTCCAAGAACAAAATGATTGAGCCTAATTACCAAGAAGTTTCAAGCAAGGGAATTCCAGAAGCTTCAAAAGATGGAGTGAGAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCTGATCCCGTCGTCATGGAACGCATTCGTGTACATTCTTGAAGGAGAAGGCGTCTTCGGCAGCTCAAAAGCGACATCAACAACAGCACATAACCTACTTCTTCTCGGTTTCGGGGACGGTTTAGAGGTTTGGAATAAGTCAGCCAAGCCTCTTAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAACTATACCAATGGATTTGAGAAAGCAAAGCATTGGAGATCAGAAGCTGGAATTTCTCTTGGGTTCTAA 906 44.7 MPEKESHNVVTEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKGIPEASKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQLIPSSWNAFVYILEGEGVFGSSKATSTTAHNLLLLGFGDGLEVWNKSAKPLRFILVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKAKHWRSEAGISLGF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35876908 35880318 + CaPI482276_09g021310.1 Cam09g2131 136460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2131 301 Pfam Pirin 33 126 IPR003829 -
Cam09g2131 301 CDD cupin_pirin_N 33 128 - -
Cam09g2131 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Cam09g2131 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Cam09g2131 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Cam09g2131 301 CDD cupin_pirin_C 176 252 - -
Cam09g2131 301 PIRSF Pirin 12 292 IPR012093 -
Cam09g2131 301 PANTHER PIRIN-RELATED 7 294 IPR012093 -
Cam09g2131 301 FunFam pirin 27 163 - -
Cam09g2131 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1689 Cam-Chr7:31584977 Cam09g2131 Cam-Chr9:35876908 1.70E-119 dispersed
Cam09g2131 Cam-Chr9:35876908 Cam10g0438 Cam-Chr10:6754886 9.80E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2131 K06911 - csv:101216351 592.038