Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2148 ATGATGAAGAGGTTCTTGTGTTTCCTATGTAGTAATAATCATAATGGGTTTTTCCCTCTCATTATCATTCTTGGTTTTCTTCTCTTGGGTGTCGCCGGAGAGATCTCCGGCGGCGGCGCTGGTGGAGGAGCAGAGAGATCATATGGTATGATAAGTTGGGATGATTTGCGTGTGGATGTTTCGTGGCGGCAGGGGATGAGCTCCGGCGAGGGGTTGGAGAATGGGACAAGAATAATTGTGGTGGATAAGAATGGCTCCGGCGACTCCACGACGGTGCAAGGGGCGGTGGATATGGTTCCTCATAATAACAAACAGAGAGTTAAGATTTGTATTCTTCCTGGCATTTACAGAGAGAAGGTATACATACCAATCACCAAACCATATATTTCCTTAATCGGAAACAAGAAACGAGTTACAGATACTGTTATTACATGGAACGACAAAGCTTCCGACAAAGATATGAATGGGGTCGAGCTTGGGACGTATAGAACAGCGACGGTTGCGATCGACTCTGACTACTTTTGTGCAACAGGAATCACATTTGAGAATACAATTGTTGCAAAGCCTGGAGATAAGGGAAGACAAGGTGTAGCTTTAAGAATAACAGGGGATAAGGCCATGTTTTATAGAGTAAAATTCTTAGGAGGACAAGATACACTTTTGGATGACATGGGCACACATTACTTCTATCAATGTCACATTCAAGGAAGTGTTGATTTCATATTTGGCACAGCTAGATCACTCTATGAGCAATGTGTTATAACTTCCACAGCAGAGAGCTTTGGAGCAATAGCAGCACATCATCGGGTCTCGCCAAATGATGACACTGGGTTCTCTTTCGTGCGCAGCGTAATTAATGGAAGTGGCAAAGTACTCCTGGGAAGAGCATGGGGAAACTATTCAAGAATAATTTATTCTTACTGTTACATTGAAGATGTAATAACTCCATTAGGTTGGGATGACTGGAATGACCCATCAAGACAAAGGACAGTAGTTTTTGGGCAATATAATTGCAGGGGCAGTGGAGCTAACACACAAGGTTGGGTGCCATGGGCAAAGACTTTCAGCTATGAGGAAGTGAGACCTTTTGTAGATAGAAAATATATCAAAGGAGAACAATGGCTTAACTTATGA 1134 42.95 MMKRFLCFLCSNNHNGFFPLIIILGFLLLGVAGEISGGGAGGGAERSYGMISWDDLRVDVSWRQGMSSGEGLENGTRIIVVDKNGSGDSTTVQGAVDMVPHNNKQRVKICILPGIYREKVYIPITKPYISLIGNKKRVTDTVITWNDKASDKDMNGVELGTYRTATVAIDSDYFCATGITFENTIVAKPGDKGRQGVALRITGDKAMFYRVKFLGGQDTLLDDMGTHYFYQCHIQGSVDFIFGTARSLYEQCVITSTAESFGAIAAHHRVSPNDDTGFSFVRSVINGSGKVLLGRAWGNYSRIIYSYCYIEDVITPLGWDDWNDPSRQRTVVFGQYNCRGSGANTQGWVPWAKTFSYEEVRPFVDRKYIKGEQWLNL 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36027755 36032110 + CaPI482276_09g021480.1 Cam09g2148 136477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2148 377 Gene3D - 74 377 IPR012334 -
Cam09g2148 377 FunFam Pectinesterase 74 377 - -
Cam09g2148 377 ProSitePatterns Pectinesterase signature 2. 234 243 IPR033131 -
Cam09g2148 377 SUPERFAMILY Pectin lyase-like 77 376 IPR011050 -
Cam09g2148 377 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 376 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cam09g2148 377 Pfam Pectinesterase 79 371 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0484 Cam-Chr9:4980404 Cam09g2148 Cam-Chr9:36027755 3.80E-73 dispersed
Cam09g1852 Cam-Chr9:33035749 Cam09g2148 Cam-Chr9:36027755 3.30E-54 dispersed
Cam09g2148 Cam-Chr9:36027755 Cam11g0456 Cam-Chr11:6005467 3.80E-65 dispersed
Cam09g2148 Cam-Chr9:36027755 Cam08g1965 Cam-Chr8:25531456 3.20E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2148 K01051 - csv:101209316 632.484