Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2184 ATGGAAGTTCTCTCGTTCTGGAGCTTGTTTCGCTCTCCTTCCGTCGTCAAATTTTCTGGTTTCCACAAAACCATTTGCATGGGTGAGGCAGTATCCATATCCAAGCATCCTAATGTCAATCACTTGGACGTTAGAAATACATCACATTCTGTCAAAAGATTTCCAAGAAGGTTGTTCTCACAGTTCATTGGTTTGTATCCTATCTTGTTATATGCATATCCTGGTTTCGGTGCACCAATGATGGACATGCAAGAACCTGACAAAGTTCGGACGCTAAAGCTTGACAGTGGAGTTCGGATCCAAGAAGTTTTTGAGGGAGATGGAGTAGAAGCACATGAAGGAGACTTGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATATTTTGTTCACAGCACCGTAGATCAATTCAGTGGAGAAAGCACACCAGTAATCCTACCTTTGAAAGAAAACCAGATAATAGAGGGCTTGAAGGAGGTACTGGTTGGCATGAGAGTTGGAGGAAAAAGAAGAGCACTTATCCCTCCTTCTGTGGGTTACATAAATGAGAATTTGAACCCAATTCCTGAAGAGTTTGGTCCTCGACGTAGTCTTTTATCACATCGGAACGAGCCCTTGATATTTGAGGATTTTCCGATGGTTTCTGATCTGTTTTTGGCTTATATTGTTTCTTCTACACTTCATTCCAGAAAACAACCAAAATCGTTCGCTTTCACAAAACCCAATTTCAAATTCCCAAATCAAAGCGCAAAGCCTGAAGGTTCAGACTATTTGAACTTCGATTTGAAAGGGCTTTTTTTGTCTGCCGAGAAAACGATGCAGAAAATGGCGCAGGGATGGTTCACGCAAGGGGGTAGTAGTGGCAGTGATAATCAACTCAAAACTTCCTCTTCATTGCTCGCCGATTGGAATTCTTACGCTGAATCACAAGCTGCTGATGATAGCAGCTCCAGTTTGGGAATTGGATTCGATCTCGAAAGTGCTGTTAGGTCCGCCAATGAAACTGTTTCAGGAACTTTCAGCGTTAATAATCTGCTGGGTGCACTCATCCATGGTGTTGGGTGTTTGGGTAAATTTGCTGCAGTGTTGCTACTTGGCTATGGCTATTACGTTTTTCGTGAGCATGATTTGGCTTACCTCCAGGTCCTCCATGCTACAGCCTGCAAGGCTTCCAGATTCACTTCATTCGAAAGGAAAATAACACCAACAGAAGAACAAGATGAGTATAAGGCCAACCAGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAACTTCCAATCTGCCACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATCTTCATTGCGTTTACCATGTTCCTCCCTGTCATGGTTCTGATGCCCCAAAAGTTCGCCATCTGCTTTACCCTTGGGTGTTGCTTCATCATTGGATCCTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGAGACTTCCTTTTACGGTGATCTTTATTGGTAGTATGTTGGGCACCTTATACGTTTCCATGGGGCTTCACAGCTATATTCTCTCTGTTATCTTCTCTGTAGTACAGGCAGCAGAGCAAAGGGCCAAGAGTCTAGTAGGGAGCTTCTCTTTGCCTTTTATCAACAATGTTCAAGCTTCTACAGATCACCGATCAAAAGAATTTCAGCTTTGCTGGGACTTAAAACCTCCAAATGTAGTCCAGGAGAGAGCTTCAACCTTGCGTCAGGTTCTTGCACTAGCATACTATGCTGTTTCATATTTCCCTGGTGGGTCTACTGGGATGAAGTTTCTTTCATCCGCTCTTACGTCTTCGGGTAGAATTCTTCTTGAATGGAAGAATAATCTAACAAGCCCCACAGATGTTTTGCGTTCGTGGAATCCAGAGGCGGCGACGCCATGTTCATGGTTTGGAGTTATGTGCAACTCCAATGGAGAGGTGGTGGAGATAGTCCTGACACTAGTGGAATTGGAAGGTACATTGCCCACAAATTTTCAGGCTCTCAAGTCCTTGAGGGTCCTTGTGATCTCTGAGACGAATATTACTGGAAGAATTCCGAAAGAATTCGGAGATTATAGTGAGCTCAATGTTCTTGATCTTAGCAGAAATTACCTCTTGGGGAAAATCCCAGAAGAGATTTGCAGGCTGAGCAAGCTGCAGGATTTGTTTCTTCATAACAATGATTTTGAAGGGAACCTACCCTTGAAGATTGGAAATCTTTCGAGCCTTGTGAATTTCCAAATCTCAGACAATAATATCAATGGGGAGGTTCCAAAGAGCATTGGAATGTTGAAGAATCTTTATCTTTTCAAAGCTGGAGGGAATAAATTTCTACAGGGTGTAGTGCCAAGGGAGATTGGAAACTGCAGCAGTTTAACGGTGTTAGGCTTATCCGACACCGGAATCTACGGACCTCTTCCTTCATCAATAGGGATGCTGCAAAAAATCCAGACCATACACATGTATAGATCACAACTTTTTGGTCCACTCCCAGAAGAGATTACAAACTGTAGTGAACTGCAGACTCTTCGACTGTATCAGAATGGTATTTCTGGACGAATACCAAGACGAATCGGGGAGATGAAAAAGCTTACCGTCCTTCTTCTATGGTTGAACTTGATGGAGGGTGAAATTCCAGAAGAAATTGGCAACTGCCAGGAACTGGTACTATTTGATCTTTCAGAAAATTCTCTAACGGGAACTATACCAAAAAGTCTAGGCCGACTTCCAAAACTCGAAGACATTCAACTAAGAATTAATCAGCTTACCGGTACAATACCACCTGAAATTTCTAATATTTCTACTTTGGTTCACCTGGAAATAGACAACAACAAATTATGGGGGGAGATACCAGTTGATATAGGTAACCTCAAGAACCTGCGTACATTGCTACTATGGGAGAACAAATTAACAGGCCCTATTCCCATCACCCTCCCAGACTGCCCAAATCTCACTTTGATTGATTTATCTTTCAATCAGTTAACAGGTCCAATACCGACACGGATTTTCGCTTTGAAAGGACTCGCCAAACTTCTTATGTTATCAAATAATCTATCAGGGATTATTCCTCCTGAAATTGGAAACTGTACCACACTATCCAGGCTAAGACTGTCTAAAAATAAGCTTGGAGGCACTATTCCATCAGAGATGGGAAATCTCAGGAACTTAGAACTTCTTGATATGGGCCAAAACCTTTTTGTTGGAGGATTTCCTTCATCCTTTTCCACATGTAACAAGCTTGAGTCTCTTGATCTACGTTCAAATAGGCTCACTAGTCTTCCAAATACTCTGCCAAAGAGCTTAGTGTATTTTAATGCATCCAACAACAGGCTTAAAGGTCAGCTCAACCCCAACATTGGAGGATTGATGGAATTAACTAAACTAGACCTCAAAAACAACCAGCTTTCAGGGAAAATCCCAGCAGAAATTGTTTCCTGTGAGAAAATCCAGTTTTTAGACCTCAGCAACAATTTCTTCTCTGGAGAACTCCCTAAGGAATTAGGTACATTTGCTTCACTTGAAATTGCTCTTAATCTAAGTTACAATCAATTCTCAGGTCAAATCCCATATGAATTCTCTGGTCTTACCAAGCTAAGTATTCTAGACCTCTCCCACAACAACTTCTCTGGGGAACTTAGCTTTCTTACAGATCTTGAAAACCTAGTCACTCTAAACATCTCCTACAACCATTTCTCTGGCAAATTGCCCGACAAACCCTTCTTTCAAAAGCTCCCTGAAAGCGCCGTTATCGGAAACAAAGACCTCATTTATGTTTTAGATGGAGGAGATACTCCTAAAGACAATAGGGAATCCAGCAACATAAGCAGAGAAGCAATACATATAGCCGTGCCTATCTTGATCAGCATAAGTGCAGTGCTGTTCTTTTTAGGATTCTACATGCTAATTCGAACCCACATGGCTCGTTTCATCCTCTTCACAGAAGGCAACAAATGGGAAATAACCCTGTTTCAAAAGCTCGATTTCTCAATCGACCACATTATAAGAAACTTAACTGCATCCAATGTGATCGGCACAGGAAGCTCCGGTGCCGTTTACAGAATCACAACCCCAAATGGGCAAACAATGGCAGTGAAGAAAATGTGGTCCACCGACGAAAATGGAGCCTTCAACACCGAAATCGAAACTTTGGGATCAATTCGACACAAGAACATAATTAGATTACTGGGTTGGGGATCCAACAGGAGTTTGAAGCTCTTGTTTTATGATTACCTTCCAAATGGAAACTTGAGCTCCCTTATCCATGGCCCTGAAAAAGGAGAAGCAGAGTGGGAAGTCAGATATGAAGTCCTTTTAGGAGTGGCTCACGCTCTAGCTTATCTTCACAATGATTGTATTCCACCAATCGTACATGGCGATGTGAAAACTATGAATATCCTGCTCGGCCATGACTTCGAACCATACCTAGCCGACTTTGGGATAGCCAAAATCGTGAGTACAAAAAGCGGCAATGATAATTCAGAGACGCCATCGTTGAGACCTCAACTTGCTGGCTCTTTCGGCTACATGGCCCCTGAACAAGGGTCGATGTTGAGAGTTACAGAGAAGAGCGATGTGTATAGCTTCGGTGTGGTGATAATGGAAGTTCTAACAGGGCGGCACCCGCTGGACCCGACTTTACCAGGAGGATCCAATTTGGTGCAATGGGTTCAAGATCATTTCGCCACACACCGAAACACAGCCGACATTTTCGATTCAAAGCTCAGAGGAAGAACCGATCCCACAATCCACGAAATGATTCAAACCCTAGCCGTCGCATTGGTCTGTGCCAGCGTTAAGGCCGACGATCGACCGCCTATGAAAGATGTCGTCACCATGCTCGAGGAGATTCGACATGTCGAATCGGGAAGAGCTGCTACCGACGTCTCCATGCCGGAAATGGCGGTAGTGGTTCAATCGCCGCCGTAG 4971 43.17 MEVLSFWSLFRSPSVVKFSGFHKTICMGEAVSISKHPNVNHLDVRNTSHSVKRFPRRLFSQFIGLYPILLYAYPGFGAPMMDMQEPDKVRTLKLDSGVRIQEVFEGDGVEAHEGDLVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEDFPMVSDLFLAYIVSSTLHSRKQPKSFAFTKPNFKFPNQSAKPEGSDYLNFDLKGLFLSAEKTMQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSYAESQAADDSSSSLGIGFDLESAVRSANETVSGTFSVNNLLGALIHGVGCLGKFAAVLLLGYGYYVFREHDLAYLQVLHATACKASRFTSFERKITPTEEQDEYKANQVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVIFSVVQAAEQRAKSLVGSFSLPFINNVQASTDHRSKEFQLCWDLKPPNVVQERASTLRQVLALAYYAVSYFPGGSTGMKFLSSALTSSGRILLEWKNNLTSPTDVLRSWNPEAATPCSWFGVMCNSNGEVVEIVLTLVELEGTLPTNFQALKSLRVLVISETNITGRIPKEFGDYSELNVLDLSRNYLLGKIPEEICRLSKLQDLFLHNNDFEGNLPLKIGNLSSLVNFQISDNNINGEVPKSIGMLKNLYLFKAGGNKFLQGVVPREIGNCSSLTVLGLSDTGIYGPLPSSIGMLQKIQTIHMYRSQLFGPLPEEITNCSELQTLRLYQNGISGRIPRRIGEMKKLTVLLLWLNLMEGEIPEEIGNCQELVLFDLSENSLTGTIPKSLGRLPKLEDIQLRINQLTGTIPPEISNISTLVHLEIDNNKLWGEIPVDIGNLKNLRTLLLWENKLTGPIPITLPDCPNLTLIDLSFNQLTGPIPTRIFALKGLAKLLMLSNNLSGIIPPEIGNCTTLSRLRLSKNKLGGTIPSEMGNLRNLELLDMGQNLFVGGFPSSFSTCNKLESLDLRSNRLTSLPNTLPKSLVYFNASNNRLKGQLNPNIGGLMELTKLDLKNNQLSGKIPAEIVSCEKIQFLDLSNNFFSGELPKELGTFASLEIALNLSYNQFSGQIPYEFSGLTKLSILDLSHNNFSGELSFLTDLENLVTLNISYNHFSGKLPDKPFFQKLPESAVIGNKDLIYVLDGGDTPKDNRESSNISREAIHIAVPILISISAVLFFLGFYMLIRTHMARFILFTEGNKWEITLFQKLDFSIDHIIRNLTASNVIGTGSSGAVYRITTPNGQTMAVKKMWSTDENGAFNTEIETLGSIRHKNIIRLLGWGSNRSLKLLFYDYLPNGNLSSLIHGPEKGEAEWEVRYEVLLGVAHALAYLHNDCIPPIVHGDVKTMNILLGHDFEPYLADFGIAKIVSTKSGNDNSETPSLRPQLAGSFGYMAPEQGSMLRVTEKSDVYSFGVVIMEVLTGRHPLDPTLPGGSNLVQWVQDHFATHRNTADIFDSKLRGRTDPTIHEMIQTLAVALVCASVKADDRPPMKDVVTMLEEIRHVESGRAATDVSMPEMAVVVQSPP 1656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36344634 36364522 + CaPI482276_09g021840.1 Cam09g2184 136513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2184 1656 SUPERFAMILY Protein kinase-like (PK-like) 1343 1631 IPR011009 -
Cam09g2184 1656 Pfam Protein kinase domain 1355 1559 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2184 1656 ProSitePatterns Protein kinases ATP-binding region signature. 1358 1381 IPR017441 GO:0005524(InterPro)
Cam09g2184 1656 Pfam Leucine rich repeat 685 744 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1470 1482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g2184 1656 FunFam Nuclear pore complex protein NUP107 618 773 - -
Cam09g2184 1656 SUPERFAMILY RNI-like 670 1014 - -
Cam09g2184 1656 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1109 1276 - -
Cam09g2184 1656 ProSiteProfiles Protein kinase domain profile. 1352 1631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2184 1656 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 110 192 IPR001179 GO:0003755(InterPro)
Cam09g2184 1656 ProSiteProfiles Leucine-rich repeat profile. 1094 1115 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 1426 1645 - -
Cam09g2184 1656 Pfam Got1/Sft2-like family 439 540 IPR007305 GO:0016192(InterPro)
Cam09g2184 1656 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1337 1425 - -
Cam09g2184 1656 Gene3D - 80 210 IPR046357 GO:0003755(InterPro)
Cam09g2184 1656 Gene3D Transferase(Phosphotransferase) domain 1 1426 1648 - -
Cam09g2184 1656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 873 1630 - -
Cam09g2184 1656 Pfam Leucine Rich Repeat 1235 1252 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Pfam Leucine Rich Repeat 1140 1160 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Pfam Leucine Rich Repeat 1192 1210 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Pfam Leucine Rich Repeat 998 1017 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Pfam Leucine Rich Repeat 1047 1068 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Pfam Leucine Rich Repeat 1164 1184 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Pfam Leucine Rich Repeat 903 924 IPR001611 GO:0005515(InterPro)
Cam09g2184 1656 Gene3D Ribonuclease Inhibitor 619 770 IPR032675 -
Cam09g2184 1656 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 791 996 - -
Cam09g2184 1656 SUPERFAMILY FKBP-like 85 210 - -
Cam09g2184 1656 SMART LRR_typ_2 1137 1161 IPR003591 -
Cam09g2184 1656 SMART LRR_typ_2 997 1020 IPR003591 -
Cam09g2184 1656 SMART LRR_typ_2 924 948 IPR003591 -
Cam09g2184 1656 SMART LRR_typ_2 1210 1233 IPR003591 -
Cam09g2184 1656 SMART LRR_typ_2 731 755 IPR003591 -
Cam09g2184 1656 SMART LRR_typ_2 1092 1115 IPR003591 -
Cam09g2184 1656 SMART LRR_typ_2 972 996 IPR003591 -
Cam09g2184 1656 Pfam Leucine rich repeat N-terminal domain 621 657 IPR013210 -
Cam09g2184 1656 SUPERFAMILY RNI-like 907 1251 - -
Cam09g2184 1656 SMART serkin_6 1352 1628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2184 1656 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1014 1108 - -
Cam09g2184 1656 Gene3D Ribonuclease Inhibitor 867 968 IPR032675 -
Cam09g2184 1656 Gene3D Ribonuclease Inhibitor 771 866 IPR032675 -
Cam09g2184 1656 Gene3D Phosphorylase Kinase; domain 1 1331 1425 - -
Cam09g2184 1656 Gene3D Ribonuclease Inhibitor 969 1274 IPR032675 -
Cam09g2184 1656 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 114 200 IPR001179 GO:0003755(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1413 Cam-Chr1:27678616 Cam09g2184 Cam-Chr9:36344634 6.70E-91 dispersed
Cam09g0974 Cam-Chr9:10058040 Cam09g2184 Cam-Chr9:36344634 2.80E-89 dispersed
Cam09g2184 Cam-Chr9:36344634 Cam07g1697 Cam-Chr7:31705775 3.20E-68 dispersed
Cam09g2184 Cam-Chr9:36344634 Cam06g1867 Cam-Chr6:29723566 2.40E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85463 PF00069 Pkinase 2.00E-35 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2184 - - - 0.0