Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2186 ATGCCGCAGGAATTAAGCTTTGTGAATTCGAAATTAATGTCTCCGAATAAGAATGTGAGAGGATTGAAAGCTCTGGTTGCGATTTGTAATGATCATGCTTCTTCTGATTCTGCGATTTCTGAGGAAGTTATCAATGACCATGAATTGGCTCATCGCAAAGCCGAAGAAGCTGCATCCAGGAGGAATCAAGCAGCAGAATGGCTACGCCAAATGGATCATGGAGCATCAGGAGTACTATCCAAGGAGCCCTCTGAAGAAGAATTCTGTCTTGCACTTCGCAATGGTCTTATCCTCTGCAATGTCCTCAACAAAGTCAATCCTGGTGCTGTTCTTAAGGTGGTGGAGAGTCCAGTTGTAACAGTTCAGTCAGCAGAAGGAGCTGCACAATCAGCAATCCAGTATTTTGAGAACATGAGGAACTTCTTGGAGGCAGTTAAAGACATGAAGCTCTTGACATTTGAAGCTTCTGACTTGGAAAAGGGAGGTACTTCAGGAAAAGTTGTAGAGTGTATTCTCTGCTTGAAAGGATATTACGAGTGGAAGCAAGCTGGTGGGATTGGGGTTTGGAGATATGGAGGAACTGTACGGATCACATCTCTCGCCAGAAGTTCACCATGCATAACTGAAAGTGAGAGTACAGACGAGTCGGTAGACGAATCAGATTCGTCTCAGTTCGAGCAGCTACTAGACTTCCTCCATCTTTCTAATGAAGTTTCAGTTGAAGAATCCAGAACTTGCAGTGCTCTTGCTTTTCTTTTTGATCGTTTTGGACTTAAACTTCTACAGGCATACCTCCGAGAGAGTGATGGGATTGAAGATTTGCCTTTAAATGCAATGGTAATTGATGCATTACTTAGCAAGGTTGTTAAGGATTTCTCTGCACTGCTTGTGTCTCAAGGCACTCAGCTTGGACTCTTTCTGAAGAAAATATTGAAAAGTGACTTGAGTTCACTGTCAAAATCTGAATTCATTGAAGCAATTTCCCGATATATCAACCAAAGAGCTAATATGGCATCAAGCGACTTCTCCAAGTTCTGTGTTTGTGGAGGAAAACGTGAGGTTATTCATAGGGCTCCTGCTGGCCATGATGAACTGGTTCATTCTCAACAGAATCAGATTCAGGAGCTAAAATCAGCATTTCAAGAAACCAAACTTGAAGTTAAACACATACAGTCTCAATGGAACGAAGAAGTTGAAAGGCTAGAACATCATCTCAAGGGCCTTGAGATGGCTTCCTCTTCTTACCACAAGGTCTTGGAAGAGAATCGTATACTTTACAATCAAGTTCAAGACCTTAAAGGAACAATAAGGGTGTACTGTAGAGTGAGGCCTTTCTTATCAGGACAATCAAATCAGCATTCTACGGTGGACTACATTGGAGAAAATGGGAACATTATGATTGCAAATCCTCTAAAGCAAGGGAAAGAAGCAAGAAGAGTATTTTCCTTCAATAAAGTTTATGGAACTAATGTTACCCAAGAAAAAATATATATCGACACTCAACCGTTGATCAGATCTGTTCTTGATGGTTTTAATGTTTGCATCTTCGCTTATGGACAAACTGGCTCGGGAAAGACATATACAATGAGTGGCCCAGATTTGATGACTGAGGACACATGGGGCGTTAATTATCGAGCTCTCAATGACTTATTCGAGATATCAAATGCAAGGTCGGATATGATAAAGTATGAAGTTGGAGTTCAAATGATTGAAATATACAATGAGCAAGTGAGAGATTTGTTGGTCAGTGATGGCTCAAACAGAAGATATCCTTTTAAACAACAAAATATACGAAACAACTCTCAACTTAGTGGCCTCAATGTGCCTGATGCAAGTTGGGTTCCGGTGACATGTACTCAAGATGTTCTTAGTTTGATGAGAATTGGCCAGAAGAATCGAGCTATTGGTGCTACGGCTTTAAATGAGAGAAGTAGTCGCTCGCATAGTGTTTTGACAATTCATGTCCTTGGAAAAGATTTGGTCTCCGGATCCACCCTTAGGGGGTGTCTTCATCTAGTAGATCTAGCTGGGAGTGAAAGAGTGGACAAATCTGAAGCTGTTGGCGACAGACTAAAGGAAGCACAGCATATAAACAAATCCCTCTCTGCACTTGGAGATGTAATTTCTGCCCTTGCACAAAAGAGTGCACATATTCCATACAGGAATAGCAAACTCACTCAACTCCTACAAGATTCTTTAGGTGGACAAGCTAAGACATTGATGTTTGTACATATAAATCCCGAAGTTGATGCTCTTGGAGAGACAATTAGCACGCTTAAGTTTGCTGAGAGAGTTGCCTCCATAGAATTAGGTGCAGCTCGTTGTAATAAAGAAAATGGTCAAATTCGAGAACTTAAGGATGAGATATCAAATCTTAAATCGGCATTGGAGAGGAAGGATGCAGAGCTTGAACAACTAAAAAGTGGCAATGCTCGAGCGTTCGTAGAAATTCAGAAGCCAAGAGCTGCCTCTCCCTTCCGCATTCTTAGACATGGTACCAATGGAGGTGCTAAGTCTGAAAATTGTCAACGGCCTTTGGATGATGCTAAAACTTTGGAGGCAAGAAGCTACTCTTCAGGAAAGCAAAGAAGGTCAAGATTTCCCTCTACATTCACGGAGAAAGATGCAATAAAAATGCCATTATTAGCTGAAGAGAGATCAACAACTAGTTCAAGCTCTGGAAACCCAAGGTCACCATCTCCACCAGTTAGGAGATCAATATCAACAGATAGGGGTGCCTTTATAAGAAGCAAGGTTAAAATGGAGACGAACGAGAACCAACCAATAGCCAAGCCTTCATTTCCTGCGAGAGTGCACATTAACAAGTCGATGGCCGCAGTCCCAGCAATCGATAATCGAGGAAGAGTAAACATCAGTTGTCAAGAGCATGAAAACTTCTCTGATGCATTGGTTGGTATCCAAAAAGCAATGGCCTCAACAAAGAAGAAACAACTGGTTTGCCAAGAAAACAATGAAGATGAACAACAGGTGAAGCAGTCTCTAAATACAATGCAAGGTGGTGCAAGGAGAAGCAGAAATGAAGGCAAAATCAAAGCAAAGCAACAGCAGTTACCGGGTGCAGCAGCTAGGATTAATAATCAAAAGCAGCCTGAGCATGTGGCAACAACATTACTTACTGATATTAATGCTGCTGTAAAAATGGAGGATGCAAGAAAGAGTGAATTCTCTGAAATGGATAACGAGCATTTTCTTGTGGGATTGCCTCTTGATGGTGCTTTGAAGGTGAAAAAAGCTCGTCAAAACTTCCCAAGAAACTCTCAGAATCTGGAACCAAGAATACCAATTTCTGGCGTCGAAGGTTTAATGAGTACAAGTAAAGTTGAGAATGGGAGTCGCAATCAAACTGAAGTTAGCGACAAATCAATGTCTGAATTTAGAAGAAGTAGATCTACTCCTCGTGGGAAATTTTTGGTAATACCATGA 3444 41.38 MPQELSFVNSKLMSPNKNVRGLKALVAICNDHASSDSAISEEVINDHELAHRKAEEAASRRNQAAEWLRQMDHGASGVLSKEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVESPVVTVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGTSGKVVECILCLKGYYEWKQAGGIGVWRYGGTVRITSLARSSPCITESESTDESVDESDSSQFEQLLDFLHLSNEVSVEESRTCSALAFLFDRFGLKLLQAYLRESDGIEDLPLNAMVIDALLSKVVKDFSALLVSQGTQLGLFLKKILKSDLSSLSKSEFIEAISRYINQRANMASSDFSKFCVCGGKREVIHRAPAGHDELVHSQQNQIQELKSAFQETKLEVKHIQSQWNEEVERLEHHLKGLEMASSSYHKVLEENRILYNQVQDLKGTIRVYCRVRPFLSGQSNQHSTVDYIGENGNIMIANPLKQGKEARRVFSFNKVYGTNVTQEKIYIDTQPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPDLMTEDTWGVNYRALNDLFEISNARSDMIKYEVGVQMIEIYNEQVRDLLVSDGSNRRYPFKQQNIRNNSQLSGLNVPDASWVPVTCTQDVLSLMRIGQKNRAIGATALNERSSRSHSVLTIHVLGKDLVSGSTLRGCLHLVDLAGSERVDKSEAVGDRLKEAQHINKSLSALGDVISALAQKSAHIPYRNSKLTQLLQDSLGGQAKTLMFVHINPEVDALGETISTLKFAERVASIELGAARCNKENGQIRELKDEISNLKSALERKDAELEQLKSGNARAFVEIQKPRAASPFRILRHGTNGGAKSENCQRPLDDAKTLEARSYSSGKQRRSRFPSTFTEKDAIKMPLLAEERSTTSSSSGNPRSPSPPVRRSISTDRGAFIRSKVKMETNENQPIAKPSFPARVHINKSMAAVPAIDNRGRVNISCQEHENFSDALVGIQKAMASTKKKQLVCQENNEDEQQVKQSLNTMQGGARRSRNEGKIKAKQQQLPGAAARINNQKQPEHVATTLLTDINAAVKMEDARKSEFSEMDNEHFLVGLPLDGALKVKKARQNFPRNSQNLEPRIPISGVEGLMSTSKVENGSRNQTEVSDKSMSEFRRSRSTPRGKFLVIP 1147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36372603 36380997 - CaPI482276_09g021860.1 Cam09g2186 136515

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2186 1147 MobiDBLite consensus disorder prediction 994 1009 - -
Cam09g2186 1147 MobiDBLite consensus disorder prediction 884 905 - -
Cam09g2186 1147 MobiDBLite consensus disorder prediction 1109 1125 - -
Cam09g2186 1147 FunFam kinesin-like protein KIN-14F 430 809 - -
Cam09g2186 1147 MobiDBLite consensus disorder prediction 994 1018 - -
Cam09g2186 1147 CDD CH_AtKIN14-like 60 175 - -
Cam09g2186 1147 ProSiteProfiles Calponin homology (CH) domain profile. 58 179 IPR001715 GO:0005515(InterPro)
Cam09g2186 1147 Pfam Kinesin motor domain 441 768 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 Coils Coil 366 411 - -
Cam09g2186 1147 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 PRINTS Kinesin heavy chain signature 718 739 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 PANTHER KINESIN-LIKE PROTEIN KLP-3 41 1019 IPR027640 GO:0003777(InterPro)|GO:0007017(PANTHER)|GO:0007018(InterPro)|GO:0008017(PANTHER)|GO:0015630(PANTHER)
Cam09g2186 1147 SMART ch_5 60 177 IPR001715 GO:0005515(InterPro)
Cam09g2186 1147 SUPERFAMILY Calponin-homology domain, CH-domain 54 196 IPR036872 -
Cam09g2186 1147 ProSiteProfiles Kinesin motor domain profile. 435 768 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 804 IPR027417 -
Cam09g2186 1147 Gene3D - 49 179 IPR036872 -
Cam09g2186 1147 Gene3D Kinesin motor domain 377 770 IPR036961 -
Cam09g2186 1147 MobiDBLite consensus disorder prediction 1109 1147 - -
Cam09g2186 1147 Coils Coil 775 809 - -
Cam09g2186 1147 Pfam Calponin homology (CH) domain 60 179 IPR001715 GO:0005515(InterPro)
Cam09g2186 1147 SMART kinesin_4 433 776 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cam09g2186 1147 MobiDBLite consensus disorder prediction 825 911 - -
Cam09g2186 1147 FunFam kinesin-like protein KIN-14F 50 179 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2186 K27887 - - csv:101221138 1978.37
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1650 Cam-Chr5:24286221 Cam09g2186 Cam-Chr9:36372603 2.20E-72 dispersed
Cam09g2186 Cam-Chr9:36372603 Cam10g1096 Cam-Chr10:23887881 1.50E-213 dispersed
Cam09g2186 Cam-Chr9:36372603 Cam03g0516 Cam-Chr3:5997210 8.80E-73 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g727 Blo03g00494 . . . . . . . . . Cma01g01058 Cma09g01033 Car01g00932 Car09g00939 . Cpe06g00841 Cpe02g00838 Bhi09g01820 . . . . Mch11g1312 . . . . . . . . Cone6ag0001 Cone9ag0003 . . Lsi02g01801 Csa07g01062 . . . . . . Bpe11g00603 . . Bma14g00667 . Cmo01g01099 Cmo09g01035 . . . . . . . . . . . . . Cla09g02100 Cam09g2186 Cec09g2255 . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007328 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 2 1 1 1 1 1 36