Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2251 ATGGCGGCCAAATCTGTATCTCAAAATCGAATCAGAGCCAAACTCCATTTCTTCTATGCAATTCTTCTGCTGCAGTTTGCTACCTTCGGATTGGCAGCCACAGCCAAGCTTCATCCAGAAGAAGTGAAAGCTTTGAAAGAGATCGAGAAGAAGATAGGGAAAAACGATTGGAATTTTAGCGTAGATCCTTGCAGTGGAGAAGGAAAATGGCGAGTCGTTAATGGAAGAAAAGGATTCGAAAGCTCCGTCACCTGTGATTGCTCTTTCAACCACAACTCCACTTGCCGTATCGTCGCCATAGCTCTGAAGTCCCAGAATCTATCAGGCATTGTGCCACCAGAGTTTTCCAAGCTTCGCTTCCTCAAACAGCTAGACCTCAGTCGAAACTGTCTCACTGGTTCTATCCCTTCACAATGGGCTACCATGCGATTGGTAGAACTCTCTTTCATGGGAAACAAATTGTCTGGCCCATTCCCGAAAGTTCTTACTAATATCACCACCCTCAGAAACCTGAGCATCGAAGGAAATCAATTTTCCGGCCAAATTCCGCCAGAGGTCGGAAAACTAATTAGTTTGGAAAAATTAGTTCTGTCATCCAATGGCCTCACCGGAGAATTGCCTAAAGCACTAGCGAAATTGTCGAACTTAACTGATGTGAGGATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAATTGGGCACAGATTGAAAAACTGCATATACAAGGCTGCTCCCTCGAGGGGCCTATACCCTTAAGTATCTCCACCATGACAAGTTTAACTGATCTGAGAATATCTGACTTAAAAGGTGGAAGGTCTCCTTTTCCGTCGTTGAGCAAAATGAAATCCCTGAAGACTCTGATACTGAGGAAGTGCTTAATTTTTGGAGAAGTCCCGAAATACATCGGGGACATGAAAAAATTGAAAAACTTAGACCTCAGTTACAATGACTTGACTGGCGAAGTTCCTGCATCTTTAGAACGACTGGAAAAAATAGATTACATAATTTTGACAGGAAACAAGCTCAATGGAATTATTCCTGGTTGGATTTTAGGAAGCAACAAGAACGTAGATCTTTCTAATAACAACTTCACTTGGGAAAACTCAAGCCCAGCTGAGTGTCCTCGTGGTAGTGTAACTAGAATCCATCCCTGCCTAAAAAGGAACTTTCCGTGTTCTGCATCAAGGGAACAGCATCACTACTCATTGCACATTAACTGTGGCGATAAAGAAGCATTTGTAAGGGGTGAAAGGTATGAAGCGGATAGAGAAGGTGCTTCAATGTTTTATACTGGTCAGAATTGGGCTTTTAGCAGCACGGGAAGCTTTATGGACAATGATGTTGATGCTGATAACTACATCATAACAAATACATCTGCTCTTTCAAATGTCTCTGTGACTGATTCAGAACTGTACACAAAAGCAAGAAACTCTCCTCAATCTCTTACATACTATGGGCTATGTCTCATAAATGGGAATTATACTGTTAAACTCCACTTTGCAGAAATTGTATTTATAAATGACAGTTCATTCAACAGCCTGGGGAGGCGAGTTTTTGATGTGTACATTCAGGAAAAGCTAGTCCTGAAAGATTTTGATATAGAACATGAAGCAGGGGGTACTGGTAAGCCCATTATGAAAACATTTACTGCAGTTGTCACAAGTCATACATTGAAAATCCATTTCTACTGGGCTGGAAGAGGAACAACAGGAATTCCACTTAGAGGAAATTATGGTCCTCTGATATCAGCTATTTCTGTAGATCCCAATTTTACACCTCCTAAGAACCACGTGAAGAAGCATCACACCATCATAATTATTGGGACAGCAGCAGCAGCTTTTGTTCTCCTTCTTCTGGTGCTATGCATTATGAGGAGGAACGGATGGCTGGGAGGCAAGGCATCCGTATATAAAGAGCTTAGAGGTATAGATCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACTAAAAATTTTGATGCTGCGAACAAAGTTGGGGAAGGTGGTTTTGGTGCAGTTTACAAGGGTCTCTTGTCAGATGGTACTATAATTGCAGTCAAGCAGCTCTCGTCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCCGCACTGCAACATCCAAATCTTGTCAAGCTTTATGGATGTTGTGTTGATGGGAACCAACTAATGTTGATTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTCAGAAATGACCCAGCTTCTAAATTGAGATTGGACTGGCCCACCAGGCAGAAAATTTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTGCATGAGGAGTCAAGACTAAAAATCGTACATAGGGATATCAAGACAAGTAATGTATTGCTTGATAAGGATTTCAATGCTAAAATTTCTGATTTTGGCTTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGCACTAGGGTTGCTGGAACCATTGGTTATATGGCTCCTGAATATGCAATGCGTGGATGCTTGACCTGCAAAGCTGATGTTTATAGCTTTGGAGTTGTTGCCCTGGAAATTGTCAGTGGCAAAAGCAATACCAACTACAGGCCTAAAGAGGAATTTGTTTACCTTCTTGATTGGGCATCTGTTCTGCAAGAAAAGGGAAGCCTATTGGAGTTGGTGGATCCAGCCTTGGGCTCAGATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCATCCCCAACTCTGCGGCCTCTAATGTCCCAAGTCGTCAGCATGCTCGAAGGTCGAACTCCAGTGCAAGCACTTCTTTCTGACCCAGGATTTTCAGCCATCAATTCCAAATTAAAGGCTCTCAGAAATCACTTTTGGCAACAATTGAGCCCAACTCACAGTTTATCATTGGACGATTTCCCTAGTGATTCCTTGAGTTCGAATGTGGACCCGGAGGCAGAAGAGAATTACAATCTTGTAGGACCCCATTCTGTTAACATGACTGGAACAAATTAG 3042 41.95 MAAKSVSQNRIRAKLHFFYAILLLQFATFGLAATAKLHPEEVKALKEIEKKIGKNDWNFSVDPCSGEGKWRVVNGRKGFESSVTCDCSFNHNSTCRIVAIALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGSIPSQWATMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGQIPPEVGKLISLEKLVLSSNGLTGELPKALAKLSNLTDVRISDNNFSGKIPEFISNWAQIEKLHIQGCSLEGPIPLSISTMTSLTDLRISDLKGGRSPFPSLSKMKSLKTLILRKCLIFGEVPKYIGDMKKLKNLDLSYNDLTGEVPASLERLEKIDYIILTGNKLNGIIPGWILGSNKNVDLSNNNFTWENSSPAECPRGSVTRIHPCLKRNFPCSASREQHHYSLHINCGDKEAFVRGERYEADREGASMFYTGQNWAFSSTGSFMDNDVDADNYIITNTSALSNVSVTDSELYTKARNSPQSLTYYGLCLINGNYTVKLHFAEIVFINDSSFNSLGRRVFDVYIQEKLVLKDFDIEHEAGGTGKPIMKTFTAVVTSHTLKIHFYWAGRGTTGIPLRGNYGPLISAISVDPNFTPPKNHVKKHHTIIIIGTAAAAFVLLLLVLCIMRRNGWLGGKASVYKELRGIDLQTGLFTIRQIKAATKNFDAANKVGEGGFGAVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVDGNQLMLIYEYMENNCLSRALFRNDPASKLRLDWPTRQKICLGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTCKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWASVLQEKGSLLELVDPALGSDYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAINSKLKALRNHFWQQLSPTHSLSLDDFPSDSLSSNVDPEAEENYNLVGPHSVNMTGTN 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37075762 37087176 + CaPI482276_09g022510.1 Cam09g2251 136580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2251 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g2251 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 237 384 - -
Cam09g2251 1013 CDD STKc_IRAK 672 940 - -
Cam09g2251 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 206 - -
Cam09g2251 1013 SUPERFAMILY L domain-like 59 403 - -
Cam09g2251 1013 ProSiteProfiles Protein kinase domain profile. 666 948 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2251 1013 Gene3D Transferase(Phosphotransferase) domain 1 742 947 - -
Cam09g2251 1013 SUPERFAMILY Protein kinase-like (PK-like) 651 939 IPR011009 -
Cam09g2251 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 594 - -
Cam09g2251 1013 Gene3D Ribonuclease Inhibitor 275 387 IPR032675 -
Cam09g2251 1013 Gene3D Ribonuclease Inhibitor 38 274 IPR032675 -
Cam09g2251 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 30 953 IPR051824 -
Cam09g2251 1013 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515(InterPro)
Cam09g2251 1013 Pfam Leucine Rich Repeat 191 213 IPR001611 GO:0005515(InterPro)
Cam09g2251 1013 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515(InterPro)
Cam09g2251 1013 Pfam Leucine Rich Repeat 121 140 IPR001611 GO:0005515(InterPro)
Cam09g2251 1013 Gene3D Phosphorylase Kinase; domain 1 637 741 - -
Cam09g2251 1013 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524(InterPro)
Cam09g2251 1013 Pfam Protein tyrosine and serine/threonine kinase 669 880 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g2251 1013 Pfam Malectin domain 406 589 IPR021720 -
Cam09g2251 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 741 - -
Cam09g2251 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 742 950 - -
Cam09g2251 1013 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515(InterPro)
Cam09g2251 1013 SMART serkin_6 666 936 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2251 1013 Gene3D - 402 593 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2251 Cam-Chr9:37075762 Cam11g1758 Cam-Chr11:30122670 3.30E-209 dispersed
Cam10g0310 Cam-Chr10:5208452 Cam09g2251 Cam-Chr9:37075762 5.40E-46 dispersed
Cam09g2251 Cam-Chr9:37075762 Cam11g1757 Cam-Chr11:30107138 1.00E-202 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85464 PF07714 PK_Tyr_Ser-Thr 2.70E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2251 - - - 0.0