Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2271 ATGCAGACCGATCACCGTAAGAAGAATTCTGCAGAATTGGACTTTTTCTCTGAATACGGCGATGCCAACAGATTCAAAGTTCGCGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACACGATATTTTTGAACATGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGGCTTCTACGTCATCCTGATATTGTTGAAATTAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATTTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAACGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCGCTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTTAGTGACACCCCAACTACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTGACCGGGAAACCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACACCGTCATTGGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCTCAGAAGTTCCCTAATGCTGATCCTCTAGCCCTGCAATTGCTACAACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCTTTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAAAGGAGAAAGGTCACAAAGGATGACATTCGCGAGCTAATATTCCTTGAGATACTAGAATACCATCCTCAACTGCTAAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTAGATCAGTTCAAAAAGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTTTAGAAAGAAAACATGCATCTCTTCCTAGGTCTTCAGTACAGTCAAATACCATTCCTCCTAAAGCTACATCAAATATTGTTTCCTTTAAAGACCGATATGCGCCAGCAGGTTCGTTCAGCAGTCAGCATTTCAGAGATCCAGCAGCGCAGAGGATTGCTACTGCTCAAGCCAAGCCTGGAAGAATCTCGGGCCCGGTCGTGCCATATGAAAGTGGAATTGTTAAAGATGCCTACGACCCGAGAATGTTAATTAGAAGTGCCCTCCCTTCTCATGCGATCCATCCAACATATTATTATCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACGGGGGCTGAACAGGACACATCCTTGCAATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAATTAGCAGGAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGTGTAGGCATGCCCAAGATCGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAGCGCTCAATATGATGCTGGAGCTGTTGCTGCTGCAACTACCACCACCCATCGAAACACTGGCACGGTCGAAATTCAGACTTTGAAACTCACTATCATCATATTGGCCATTGAAGAGGAAGCTGAGCTTATTGATGGATAG 1860 42.31 MQTDHRKKNSAELDFFSEYGDANRFKVREVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPAGSFSSQHFRDPAAQRIATAQAKPGRISGPVVPYESGIVKDAYDPRMLIRSALPSHAIHPTYYYQQSCGQNEERSATGAEQDTSLQCKQSPQCGMAAKLAGDTAATGAFSNPFFMARVGMPKIGNNDRAARLQVSAQYDAGAVAAATTTTHRNTGTVEIQTLKLTIIILAIEEEAELIDG 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37215197 37219250 - CaPI482276_09g022710.1 Cam09g2271 136600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2271 619 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2271 619 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2271 619 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Cam09g2271 619 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cam09g2271 619 Pfam Protein kinase domain 26 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2271 619 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cam09g2271 619 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 355 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam09g2271 619 FunFam Mitogen-activated protein kinase 17 118 - -
Cam09g2271 619 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cam09g2271 619 FunFam Mitogen-activated protein kinase 111 339 - -
Cam09g2271 619 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g2271 619 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1581 Cam-Chr6:27299321 Cam09g2271 Cam-Chr9:37215197 3.50E-199 dispersed
Cam07g0656 Cam-Chr7:12837282 Cam09g2271 Cam-Chr9:37215197 1.90E-184 dispersed
Cam07g1060 Cam-Chr7:24961227 Cam09g2271 Cam-Chr9:37215197 2.60E-207 dispersed
Cam08g1951 Cam-Chr8:25414855 Cam09g2271 Cam-Chr9:37215197 5.20E-88 dispersed
Cam09g2271 Cam-Chr9:37215197 Cam10g1155 Cam-Chr10:24747366 7.10E-45 dispersed
Cam02g1903 Cam-Chr2:32077271 Cam09g2271 Cam-Chr9:37215197 1.70E-248 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85465 PF00069 Pkinase 1.00E-66 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2271 - - - 0.0