Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2282 ATGTCAAATGATGAAGGCAAAAATGTGTACCAGCAGTATGATCCATTCCAATACAACCAGTTGGATATGAACCGTTCGATCTTCCATCAACAAGCGGCGACGTTGGATCCTGCTTTGATGAGCTTCACTAACTTCTTCGATACCTCGTTGGATTACAACAGCCTGTCGAAGGCGTTCGACGTGTCGTGCTGTTCATCCGAAGTCATTTCTGCAGTGGACGACATGTCGAAATCAAAGAAGGCTTCGACGACCACCCCAAATTCTTCAGTGTCGTCGTCGTCTAATGAAGCTGTAGTTGAAGAAGATTCAGTCAAGAGCAACAAAGAGGACATAAAAGGGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGAACAGCATAACAAAAAAGAAAGAGAAACGGCAGAGGGAGCCCCGTTTTGCTTTCTTGACTAAGAGTGAGATTGATCACCTTGAAGATGGTTATAGATGGAGAAAATATGGTCAGAAAGCAGTTAAAAATAGTCCTTACCCCAGAAGCTACTATAGATGCACCAGCCAAAAATGTGTAGTGAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTAGTGATTACTACATATGAAGGCCAACACAACCACCATTGTCCAGCTACACTCCGAGGCCATTCTGCAGGGATCATGTCGTCTCCATTCTATGCATCAGCATCAACATCGGTAACGGCAGCCTCATCGGGGCCTACGCTTCCACAAGAACTCTTCTCACATTTGTTACCGACAAATAACTGCCAAACCGACCCGGCCTCGATGATGTACCAAAATCTAAGCCTTCAACAACACCTTCAAATGCCTGATCATTATGGTTTGTTGCAAGATTTGTTCACTCAAAAATAG 879 43.34 MSNDEGKNVYQQYDPFQYNQLDMNRSIFHQQAATLDPALMSFTNFFDTSLDYNSLSKAFDVSCCSSEVISAVDDMSKSKKASTTTPNSSVSSSSNEAVVEEDSVKSNKEDIKGCENKDEEKSKKQNSITKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASASTSVTAASSGPTLPQELFSHLLPTNNCQTDPASMMYQNLSLQQHLQMPDHYGLLQDLFTQK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37291313 37293111 + CaPI482276_09g022820.1 Cam09g2282 136611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2282 292 MobiDBLite consensus disorder prediction 75 139 - -
Cam09g2282 292 MobiDBLite consensus disorder prediction 101 139 - -
Cam09g2282 292 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g2282 292 SUPERFAMILY WRKY DNA-binding domain 145 212 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g2282 292 MobiDBLite consensus disorder prediction 75 100 - -
Cam09g2282 292 FunFam WRKY transcription factor 57 138 212 - -
Cam09g2282 292 SMART WRKY_cls 152 211 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g2282 292 Gene3D WRKY domain 136 213 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g2282 292 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam09g2282 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 220 IPR044810 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2492 Cam-Chr1:36615537 Cam09g2282 Cam-Chr9:37291313 1.80E-42 dispersed
Cam06g0441 Cam-Chr6:6524678 Cam09g2282 Cam-Chr9:37291313 4.90E-37 dispersed
Cam08g1480 Cam-Chr8:21065548 Cam09g2282 Cam-Chr9:37291313 4.40E-37 dispersed
Cam09g0494 Cam-Chr9:5096396 Cam09g2282 Cam-Chr9:37291313 5.10E-30 dispersed
Cam09g2282 Cam-Chr9:37291313 Cam10g1134 Cam-Chr10:24459105 3.30E-32 dispersed
Cam02g1905 Cam-Chr2:32116765 Cam09g2282 Cam-Chr9:37291313 1.50E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52659 PF03106 WRKY 5.40E-25 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2282 - - - 0.0