Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2292 ATGGCCGCGTCAGAGATGATGATGAAAAAGGGTGGTAGTGGACCACCGCCTTGCGCTGCTTGCAAGCTTCTGCGCCGGCGGTGTGCTCCGGACTGCGTTTTTGCTCCCTATTTCCCTTCCGATCAGCCTCACAAATTCTCAAGTGTTCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCATCAAAGGAGCGATGCTGTGAGTTCAATGGTATATGAGGCAAACGCAAGGATTCGAGATCCGGTATACGGATGCGTGGGAACGATATCGTGTCTACAACGGGAAGTAGATGCATTGCAACAACAACTAGCAATGACACGGGCCCAGCTAGTTCAATTGAAAATGGGCCAATTTGCATCAACATCACAAGCATCATCTAGTACGGATGACCTCCTTCCTCCTCCGCCCAATATCAATGTGGGCGCATCACCATCCTTGTGGTCTTGCTAG 471 50.32 MAASEMMMKKGGSGPPPCAACKLLRRRCAPDCVFAPYFPSDQPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQREVDALQQQLAMTRAQLVQLKMGQFASTSQASSSTDDLLPPPPNINVGASPSLWSC 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37390670 37392936 + CaPI482276_09g022920.1 Cam09g2292 136621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2292 156 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Cam09g2292 156 Coils Coil 96 116 - -
Cam09g2292 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 127 - -
Cam09g2292 156 MobiDBLite consensus disorder prediction 131 156 - -
Cam09g2292 156 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2000 Cam-Chr2:33053154 Cam09g2292 Cam-Chr9:37390670 2.90E-38 dispersed
Cam07g0466 Cam-Chr7:6456415 Cam09g2292 Cam-Chr9:37390670 2.70E-39 dispersed
Cam09g2292 Cam-Chr9:37390670 Cam10g1288 Cam-Chr10:26329080 3.40E-36 dispersed
Cam02g1919 Cam-Chr2:32276117 Cam09g2292 Cam-Chr9:37390670 2.60E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52661 PF03195 LOB 2.60E-43 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2292 - - - 0.0