Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g2296 | ATGGCGTCTTCGTCTTTAGGTTTCATCTTTGTTCTTTGTGCTATTGCTTCCATCGTCGCCCACCTGATTGTTTTGTCTCAAGCTCAGAATTCAACTCTACCCCCCACCGATCCTGATCAAGCAAGAGCTCTGAATTCCATATTTCGACAATGGCGTATATCGGCTCCATCAGGGGCGTGGAATATAAGCGGGAATCTGTGCAGTGGGAGAGCTGTCGACACTACAACCCCCATCGATAGTAATGGAAACCTCAATCCTCTTATAAAATGTGATTGCTCAGCCAACAATGGTGCTACTTGCCTCATTACTCAACTGCACGTTTATGCGATAAATGTTGTTGGTGTACTCCCACCAGAGCTATGGACATTAACTTCCCTCACCTATCTGAAGCTGGATCAAAATTTCTTGACAGGAACATTATCTGCATCTGTTGGCAATCTCACAGAATTGCGAACCTTGAGCCTGGGCATTAATGCATTATCAGGGGAACTTCCGAAGGAACTTGGATCTCTTTCTAAACTAGAAGTATTGGCATTCGGGTCCAACAATTTCTCTGGTCCCTTACCGTCAGAGCTTGGAAGTCTTTCTATGTTAAGGGAGCTATACATTGATAGCTCTGGAGTTTCTGGTGGTATTCCTCCATCATTTTCAAGTCTGAGAAACTTGCAGACAGTATGGGCATCAGACAATGAATTCACTGGCAGAATACCTGATTTCATCGGGAGTTGGACAAGGCTCACATCTCTGAGGTTTCAAGGAAACTCTTTTACAGGTCCTATACCATCGACGTTTTCAAACTTGACATCTCTGACTGAGTTGAGAATAGGTGATTTATCCAATGGGAGCTCTTCTCTGGCATTCGTCAGTAATATGACATCTCTAACTATCCTGGTGTTGAGAAATAATAATATGACTGGTTCAATTCCATCCAACATTGGAGGATTTCGTAGACTTACCCAGCTGGACTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCGCTTTTCAGTTTGAGTTCACTGTCACACTTGATTCTTGGAAATAATAAGTTAAATGGGACCCTACCTACACAGAAGAGTGCATCACTTCTAAATATAGACTTGTCATATAACGATTTATCAGGTAGCTTTCCTGCTTGGATCAACGAGCAAAACTTACAACTAAATTTAGTCGCCAACAATTTCACAATTGACAGTGCTAGTATCAGTGGTTTGCCTTCTGGATTGAATTGTCTTCAACGCAACTTTCCTTGTAATCGAGGTCGTCCAATATATTCTGATTTTGGGATCAAGTGTGGAGGTCCACAGATCAGAAGTTCATCAGGGATTTTGTTTGAAAGAGAAAATGAGACTCTCGGTCCTGCTACATACTTTGTTACTGAGTCACAAAGGTGGGCCGTTAGTAATACTGGATACTTTACTGGGACCAACGATCCTCAATACACAGCCAATACGTTGTCTCAATTCCCAAACACCCTTGACACAGAACTTTTTCAGACACAGCGACTATCTGCTTCATCATTGAGATACTATGGACTAGGGCTTGAGAATGGCAACTACACTGTGAACCTTCATTTTGCAGAGCTAGCTTTCCCAGATTCAAATACATGGCAAAGCCGTGGGAGGCGTCTCTTTGATATATATATACAGGGAAATCGTGTGTTACAGAATTTTGATATTAGAAAGGAGGCAGGTGGGTCTTTCCTTGCTGTCAGAAAGAATTTTACGGCTGAAGTTACAGAAAACTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACTTGCTGCATACCTAAACAGGGTGATTTTGGACCCGCTGTTTCAGCCATCAGTGCTACCCCAGATTTTGTACCAACTGTCAGTAACGTTCCTCCAAGTACTAAGGAGAATAGAACAGGCCTAATCGTAGGGCTCGTTGTTGGTTTAGGATCTGTTTTCTTTCTGATTATTGGCACAGTTTTCCTTGTTGTTCAGAGAAGGAAAAGGCGTCGCGCCTATGAAGATGAAGAGCTCCTAGGAATAGACACTAGACCGTACACTTTTAGTTTTTCTGAATTAAGGAGTGCTACAAATGACTTTAATTCATCCAACAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACATTAAATGATGGAAGAGTGGTTGCTGTGAAGCAACTTTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCAGTGCAACATCGTAACCTTGTGAAATTATATGGATGTTGCATTGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAACAAGAGTCTTGACCAAGCATTATTTGGACAAAAACATTTGATTATTGATTGGCCAACACGTTTTGAGATATGCGTGGGTGTAGCAAGGGGCCTCACTTACCTTCATGAGGAATCGAGGCTTCGCATAGTGCACAGAGATGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTATGATGACAAAAAGACTCATATAAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGATGTCTTTGGATTTGGCGTTGTGGCTCTTGAAATTGTTAGTGGAAGGCCAAATTCAGACCCAAGCTTAGAGCAAGACAAAGTATATCTTCTCGAATGGGCATGGTACCTCCACGAAAACAACTGTGAACTTGAGATGGTGGATTCTGAATTATCAGAGTTCAGTAAGGAGGAAGTAAAAAGGGTGATCGGTGTAGCTCTTCTGTGTACTCAAACATCTCCAGCTCTTCGGCCATCGATGTCCCGTGTGGTGGCAATGCTGACTGGAGACATTGAAGTGGCCGCTGTAACTTCCAAACCAGGATACCTGACAGATTGGAAATTTGATGACATTACAAGCTTTATAGATACTCCATCAACTGAAGAACCTGATACTGGCCGTTATGCATCGACAAGTTCGAGTATCGTTGATACACATCGCTCACCAGCCAATGCTTCTGAACCAATGCTTCGTGGATTATTAGGAGAGGGTAGGTGA | 3105 | 42.96 | MASSSLGFIFVLCAIASIVAHLIVLSQAQNSTLPPTDPDQARALNSIFRQWRISAPSGAWNISGNLCSGRAVDTTTPIDSNGNLNPLIKCDCSANNGATCLITQLHVYAINVVGVLPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRTLSLGINALSGELPKELGSLSKLEVLAFGSNNFSGPLPSELGSLSMLRELYIDSSGVSGGIPPSFSSLRNLQTVWASDNEFTGRIPDFIGSWTRLTSLRFQGNSFTGPIPSTFSNLTSLTELRIGDLSNGSSSLAFVSNMTSLTILVLRNNNMTGSIPSNIGGFRRLTQLDLSFNNLTGEIPSSLFSLSSLSHLILGNNKLNGTLPTQKSASLLNIDLSYNDLSGSFPAWINEQNLQLNLVANNFTIDSASISGLPSGLNCLQRNFPCNRGRPIYSDFGIKCGGPQIRSSSGILFERENETLGPATYFVTESQRWAVSNTGYFTGTNDPQYTANTLSQFPNTLDTELFQTQRLSASSLRYYGLGLENGNYTVNLHFAELAFPDSNTWQSRGRRLFDIYIQGNRVLQNFDIRKEAGGSFLAVRKNFTAEVTENFLEIHLFWAGKGTCCIPKQGDFGPAVSAISATPDFVPTVSNVPPSTKENRTGLIVGLVVGLGSVFFLIIGTVFLVVQRRKRRRAYEDEELLGIDTRPYTFSFSELRSATNDFNSSNKLGEGGFGPVYKGTLNDGRVVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGQKHLIIDWPTRFEICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSDPSLEQDKVYLLEWAWYLHENNCELEMVDSELSEFSKEEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDIEVAAVTSKPGYLTDWKFDDITSFIDTPSTEEPDTGRYASTSSSIVDTHRSPANASEPMLRGLLGEGR | 1034 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37424461 | 37433889 | - | CaPI482276_09g022960.1 | Cam09g2296 | 136625 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g2296 | 1034 | FunFam | Os05g0263100 protein | 41 | 280 | - | - | |
Cam09g2296 | 1034 | MobiDBLite | consensus disorder prediction | 993 | 1034 | - | - | |
Cam09g2296 | 1034 | Pfam | Malectin domain | 430 | 612 | IPR021720 | - | |
Cam09g2296 | 1034 | Pfam | Protein tyrosine and serine/threonine kinase | 698 | 962 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam09g2296 | 1034 | FunFam | Leucine-rich repeat receptor-like protein kinase | 426 | 616 | - | - | |
Cam09g2296 | 1034 | Gene3D | Transferase(Phosphotransferase) domain 1 | 771 | 974 | - | - | |
Cam09g2296 | 1034 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 20 | 989 | IPR051824 | GO:0005886(PANTHER) | |
Cam09g2296 | 1034 | Gene3D | Ribonuclease Inhibitor | 59 | 281 | IPR032675 | - | |
Cam09g2296 | 1034 | Gene3D | Ribonuclease Inhibitor | 282 | 418 | IPR032675 | - | |
Cam09g2296 | 1034 | SUPERFAMILY | L domain-like | 103 | 380 | - | - | |
Cam09g2296 | 1034 | MobiDBLite | consensus disorder prediction | 993 | 1017 | - | - | |
Cam09g2296 | 1034 | FunFam | Leucine-rich repeat receptor-like protein kinase | 664 | 770 | - | - | |
Cam09g2296 | 1034 | Pfam | Leucine Rich Repeat | 245 | 267 | IPR001611 | GO:0005515(InterPro) | |
Cam09g2296 | 1034 | Gene3D | Phosphorylase Kinase; domain 1 | 656 | 770 | - | - | |
Cam09g2296 | 1034 | CDD | STKc_IRAK | 701 | 965 | - | - | |
Cam09g2296 | 1034 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 815 | 827 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam09g2296 | 1034 | Gene3D | - | 429 | 616 | - | - | |
Cam09g2296 | 1034 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 281 | 404 | - | - | |
Cam09g2296 | 1034 | SUPERFAMILY | Protein kinase-like (PK-like) | 678 | 997 | IPR011009 | - | |
Cam09g2296 | 1034 | Pfam | Leucine rich repeat | 293 | 352 | IPR001611 | GO:0005515(InterPro) | |
Cam09g2296 | 1034 | ProSiteProfiles | Protein kinase domain profile. | 695 | 969 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam09g2296 | 1034 | SMART | serkin_6 | 695 | 963 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam09g2296 | 1034 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 771 | 975 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g1129 | Cam-Chr5:10486718 | Cam09g2296 | Cam-Chr9:37424461 | 5.70E-70 | dispersed | |
Cam06g1535 | Cam-Chr6:26811109 | Cam09g2296 | Cam-Chr9:37424461 | 6.90E-89 | dispersed | |
Cam07g1057 | Cam-Chr7:24920524 | Cam09g2296 | Cam-Chr9:37424461 | 3.70E-89 | dispersed | |
Cam09g2296 | Cam-Chr9:37424461 | Cam11g1759 | Cam-Chr11:30146808 | 4.00E-149 | dispersed | |
Cam09g2296 | Cam-Chr9:37424461 | Cam11g1757 | Cam-Chr11:30107138 | 9.80E-140 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85467 | PF07714 | PK_Tyr_Ser-Thr | 6.90E-46 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g2296 | - | - | - | 0.0 |