Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g2321 ATGTTCCATCCTAAGAAAGCTTCGACTATGAATTCTCACGAGAGAGGGATGTGCGTTCAAGGCGACTCCGGTCTCGTCCTCACCACCGACCCCAAGCCCCGCCTTCGCTGGACTGTTGAGCTTCATGAGCGCTTTGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCTACACCAAAGACCATCATGAGAGTTATGGGTGTAAAGGGTCTTACACTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGATTGGGAAAGCAGCCTCACAAGGAATTCAATGATCATTCAATTAAGGATGGTATGAGAGCCTCAGGTTTAGAACTTCATCGAAACACGGCTTCTTCATCCAATATGATCAACCGCACCATGAATGATGGTAACTCACACATGGTTGATGCGATTAGGATGCAAATGGAGGTGCAGAGAAGATTGCATGAGCAACTAGAGGTGCAAAGACACTTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAAAAGGCTTGTCAAACCCTAGCGGGTGAAAACATGGCAGCTTCCGGCGGCTACAAGGCCATGGGGGGCATCCCAAATAATAATAATAATCAGCAAGGCATTAGCGACATGGCCGGAGCCGGAGGGATCAAAGATTTTGGCTCCCCCCTCGGCTTCCCTTCTTTTCAAGACCTGAACCTCTATGGAGGCGACCACCTTGATCTTCAGCAAAACGTGGATGGATTCATGCCTCACAACGACAGTTTACTGTGCTTGGGAAAGAAGAAGCCGAGGCCCCCGCCATCTACGCCAAACTACGGCGCCAGCTCGGGAAAAGGTGCATTGGACTGGCCGGACGATCTCCGGCTGCAAGATATAGGAATGGCACCGCCGTCCTGCGTGGGGCAGCAAGAAGATGATTTCAAAGGCATTGGTGGGACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCAAAGCCAGTAGTGTCGGATGAAGGCATTGGGGATCACAAGAAGTATGACATCAATAATAATGATAATAATAACAACAATAATAATAATAATAATGCGTCCATAAAGCTTCAGAGGCCGTCCCCCAGAAGGGCACCCCTTTCCATGGATAGGGCCAACCACCCTCTTACCACTGCTCCTCAGTCCACACATTCACCTTTTGGTTAA 1176 49.06 MFHPKKASTMNSHERGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASGLELHRNTASSSNMINRTMNDGNSHMVDAIRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAASGGYKAMGGIPNNNNNQQGISDMAGAGGIKDFGSPLGFPSFQDLNLYGGDHLDLQQNVDGFMPHNDSLLCLGKKKPRPPPSTPNYGASSGKGALDWPDDLRLQDIGMAPPSCVGQQEDDFKGIGGTLVERDHLEEMYEAKPVVSDEGIGDHKKYDINNNDNNNNNNNNNNASIKLQRPSPRRAPLSMDRANHPLTTAPQSTHSPFG 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37620261 37622296 + CaPI482276_09g023210.1 Cam09g2321 136650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g2321 391 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 199 IPR046955 GO:0003700(InterPro)
Cam09g2321 391 MobiDBLite consensus disorder prediction 377 391 - -
Cam09g2321 391 MobiDBLite consensus disorder prediction 343 361 - -
Cam09g2321 391 MobiDBLite consensus disorder prediction 323 342 - -
Cam09g2321 391 MobiDBLite consensus disorder prediction 323 391 - -
Cam09g2321 391 FunFam Myb family transcription factor 31 89 - -
Cam09g2321 391 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677(InterPro)
Cam09g2321 391 Gene3D - 31 89 - -
Cam09g2321 391 MobiDBLite consensus disorder prediction 258 277 - -
Cam09g2321 391 Pfam Myb-like DNA-binding domain 34 84 IPR001005 -
Cam09g2321 391 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Cam09g2321 391 Pfam MYB-CC type transfactor, LHEQLE motif 132 177 IPR025756 -
Cam09g2321 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2321 Cam-Chr9:37620261 Cam11g0985 Cam-Chr11:16711235 3.10E-30 dispersed
Cam04g0220 Cam-Chr4:7730369 Cam09g2321 Cam-Chr9:37620261 4.30E-19 transposed
Cam05g0378 Cam-Chr5:3480599 Cam09g2321 Cam-Chr9:37620261 9.90E-43 transposed
Cam07g0128 Cam-Chr7:2465804 Cam09g2321 Cam-Chr9:37620261 1.20E-21 transposed
Cam07g0221 Cam-Chr7:3340210 Cam09g2321 Cam-Chr9:37620261 3.40E-33 transposed
Cam10g1414 Cam-Chr10:27795707 Cam09g2321 Cam-Chr9:37620261 7.10E-16 transposed
Cam10g1350 Cam-Chr10:27048381 Cam09g2321 Cam-Chr9:37620261 1.20E-34 transposed
Cam02g1942 Cam-Chr2:32518806 Cam09g2321 Cam-Chr9:37620261 1.00E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52663 PF00249 Myb_DNA-binding 2.20E-06 CL0123 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g2321 - - - 0.0