Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g0010 | ATGTCGTCGAACCATTCGGATTTGGAATCTTCAGCTTTTGATACTCAAACTTCGTCCAATCCGATTGCTCCCTTGGATCATCTTCCCTCCACCTCCTCCACTCTCTCTGAATCTGAAGAAAATCCCTGCACATCATCTTCGCCTTCCTCCACTCCACCTCCGATTCACCTACCTCTCTCTTGGCCTACCGATGCCACCCTTTCCCTCCAATGGATACACCATCTCATCGCCGCCTTCGACTGGTCTTCCAAAAATTTACCTCCATCCCAGTTTCCTTCCGTCCTTCCCGTCTCCGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAGAATCCTCCAAGACTCAGCCGCCAGCAGCGACTCGACTGTAGTCGTCGTCGGAGACATCCACGGCCAATTTCATGATCTCCTCTTTCTTCTGCAGGATGCTGGTTTTCCTTCTGAAAACCGCTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAACCAAGTACGGAGACAAGGGTAAGCATGTATATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTGGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGCATATCAGTTCCTTCGTCTAAAAGGTCGAAAGGGAAAAAAAATCGTAGGATAATCTTAAATCCCGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCCTCGATGAATCCTGGTCTCTCCCCAAATAAAGAGAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCAATCTGAAGCTAATTATTAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGCAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCAGGGAAACTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCAACTGAGGAGAGATACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATTCATAGTTTTGATGCCATTACTCCACGACCAAAGGTCAATGCATATTACGATTTTGAGGATGTAATTGATTCTGACGAAGAATTAGACTTGGCTTCAATGGCAACTGATCCATGA | 1386 | 45.6 | MSSNHSDLESSAFDTQTSSNPIAPLDHLPSTSSTLSESEENPCTSSSPSSTPPPIHLPLSWPTDATLSLQWIHHLIAAFDWSSKNLPPSQFPSVLPVSVFDTLILTASKILHKEPNCLRILQDSAASSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKFNLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFDAITPRPKVNAYYDFEDVIDSDEELDLASMATDP | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1753465 | 1764977 | - | CaPI482276_10g000100.1 | Cam10g0010 | 136673 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g0010 | 461 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 195 | 200 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | CDD | MPP_PP7 | 61 | 441 | IPR041754 | - | |
Cam10g0010 | 461 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 34 | 453 | IPR051134 | - | |
Cam10g0010 | 461 | FunFam | Serine/threonine-protein phosphatase | 79 | 455 | - | - | |
Cam10g0010 | 461 | SUPERFAMILY | Metallo-dependent phosphatases | 92 | 433 | IPR029052 | - | |
Cam10g0010 | 461 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Cam10g0010 | 461 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Cam10g0010 | 461 | Pfam | Calcineurin-like phosphoesterase | 131 | 357 | IPR004843 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | Gene3D | - | 89 | 449 | IPR029052 | - | |
Cam10g0010 | 461 | SMART | pp2a_7 | 95 | 431 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | PRINTS | Serine/threonine phosphatase family signature | 194 | 218 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | PRINTS | Serine/threonine phosphatase family signature | 131 | 158 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | PRINTS | Serine/threonine phosphatase family signature | 231 | 257 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | PRINTS | Serine/threonine phosphatase family signature | 385 | 401 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | PRINTS | Serine/threonine phosphatase family signature | 161 | 188 | IPR006186 | GO:0016787(InterPro) | |
Cam10g0010 | 461 | PRINTS | Serine/threonine phosphatase family signature | 291 | 318 | IPR006186 | GO:0016787(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam09g2042 | Cam-Chr9:34960670 | Cam10g0010 | Cam-Chr10:1753465 | 1.10E-113 | dispersed | |
Cam10g0010 | Cam-Chr10:1753465 | Cam11g1310 | Cam-Chr11:25847839 | 2.80E-30 | dispersed | |
Cam10g0010 | Cam-Chr10:1753465 | Cam09g2255 | Cam-Chr9:37113115 | 1.80E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g0010 | K04460 | - | csv:116402510 | 821.617 |