Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0106 ATGTGGGCCCAGGCTGTCCTCCGTGAGAATCAGCGAGTGATAGTGGAGTTAGAGAATGTTTTGTTTCTCAGTGTAACTGCAGAAATTAAGCGAGAATATGCTCTGTTCGGCGATATTTTAGGGATTTTGATTGCTGTTGCTGTTGGTTGTCATTGCTTAGTGGTGAAGAATTTTCTTGGCAGCCAAACAGTGTGCGGCGGATTTCAGTTCCATTTTCGGTGGATAAAAGCTTCGAGAGTAAAAAAAAGGCAAAACGACGGGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATAAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGATTTTGACACAGCTTCAGAAGGGGTACCATACCCTTACATAGGAGGGGCAAGTGCAAGTTCAACTCCTGCTTGGGACTTCCCTCCTGTTAATCGGCACCCACATGTCAGATCTGAGTCTAGATTTAAAGGGACTTTCAGAGGAGATCAGACCCCTGGAGGCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGAGAGAACTATGATAGAATAACGGAGCTCTATAATGTCCAGAGATTCAATCAACAAGCTCTTCATACGCCACCGAGAACTGAGGACGGGAGGGATTCTTCATACTCAAAGATGGGAAGGGACAGTCCGATGACTTCCGCAAACAAAGATTGGACGCCGAGAAACTATAAACCTTCTGGAAGTAAAGGATTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACCCCTATGCAGGCTCAAGTGCCTACCCAGCAGGCAGCACCAAAGGTGACATGTCGTCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCATTAGCAATGCAAGCGACATCGAGGCAGAATGGGTCGAGGAAGATGAGCCGGGGGTCTATATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTTAGATTCAGCCGTGAAAGGTTCGGGGAAATGAACGCAAAGCAATGGTGGGAACACAACAGGGAGAGGATCCAAGCTCAATACCTATAA 1305 47.74 MWAQAVLRENQRVIVELENVLFLSVTAEIKREYALFGDILGILIAVAVGCHCLVVKNFLGSQTVCGGFQFHFRWIKASRVKKRQNDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHVRSESRFKGTFRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSANKDWTPRNYKPSGSKGFPSDQHFDHGSSHPYAGSSAYPAGSTKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2637708 2644225 - CaPI482276_10g001060.1 Cam10g0106 136769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0106 434 PANTHER PROTEIN BREVIS RADIX-LIKE 1 82 434 IPR044532 -
Cam10g0106 434 MobiDBLite consensus disorder prediction 276 372 - -
Cam10g0106 434 MobiDBLite consensus disorder prediction 83 104 - -
Cam10g0106 434 Pfam Transcription factor regulating root and shoot growth via Pin3 378 433 IPR013591 -
Cam10g0106 434 Pfam Transcription factor regulating root and shoot growth via Pin3 215 269 IPR013591 -
Cam10g0106 434 MobiDBLite consensus disorder prediction 296 320 - -
Cam10g0106 434 Pfam Transcription factor BRX N-terminal domain 96 129 IPR027988 -
Cam10g0106 434 MobiDBLite consensus disorder prediction 345 372 - -
Cam10g0106 434 ProSiteProfiles BRX domain profile. 215 270 IPR013591 -
Cam10g0106 434 ProSiteProfiles BRX domain profile. 379 434 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0106 Cam-Chr10:2637708 Cam11g0166 Cam-Chr11:3247912 8.80E-50 dispersed
Cam10g0106 Cam-Chr10:2637708 Cam09g0084 Cam-Chr9:1696885 4.30E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0106 - - - 0.0