Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0169 ATGGCTGGATTGGATTTAGGGAGTCGATATCTAACTCACCTTCAAACGCCAGTAGACGATCTAGTAAATCGTAGTGGTCATTTCTCTTCCGGTGACCACCAAGACGATGACGATCCCCATCAAGCCCTTGGTGGCCCGGGGGACGTCGTTGGCCGCCGCCCTCGCGGACGGCCACCCGGTTCGAAAAACAAGCCAAAGCCACCAGTAATCATCACCCGTGAGAGCGCCAACACACTACGTGTCCACATCTTAGAGGTCGGGAGTGGCTGCGACGTTTTCGATTGCGTCGCCTCCTATGCCCGCCGGCGACAGCGTGGGATCTGTATTTTGAGTGGCAGCGGTAACGTCACCAACGTTGGCCTCCGCCAGCCAGCGGCGGCAGGGGCGGTGCTGACTCTTCAAGGGAGGTTTGAAATTTTGTCGCTTTCTGGGTCGTTTCTGCCGCCGCCCGCTCCACCTGGCGCCACGAGTTTGACGATATTTTTAGCCGGAGGACAGGGGCAGGTTGTGGGAGGGACGGTGGCCGGGGAATTAACGGCGGCCGGGCCAGTGATTTTGATTGCAGCTTCTTTTACTAATGTGGCGTATGAGAGATTGCCACTGGATGAGGAGGATCAGCAGCAAGCTCCGGCAGGCGGCAGCGGCGGAAGCAGCGGCGGAGTGGGTAATAACAACAACAATCCATTTCAAGACCCATCAAATTCAGGGCTTCCATTCTTGAATTTGCCACTGCATATGCAAAATGTTCAACTTCCACCCTTTTGA 765 55.95 MAGLDLGSRYLTHLQTPVDDLVNRSGHFSSGDHQDDDDPHQALGGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPAAAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQAPAGGSGGSSGGVGNNNNNPFQDPSNSGLPFLNLPLHMQNVQLPPF 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3301644 3302408 - CaPI482276_10g001690.1 Cam10g0169 136832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0169 254 Gene3D - 79 208 - -
Cam10g0169 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 222 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam10g0169 254 MobiDBLite consensus disorder prediction 210 236 - -
Cam10g0169 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 192 IPR005175 -
Cam10g0169 254 ProSiteProfiles PPC domain profile profile. 76 212 IPR005175 -
Cam10g0169 254 FunFam AT-hook motif nuclear-localized protein 79 206 - -
Cam10g0169 254 CDD DUF296 80 191 IPR005175 -
Cam10g0169 254 MobiDBLite consensus disorder prediction 205 236 - -
Cam10g0169 254 PIRSF ESCAROLA 8 250 IPR014476 GO:0003680(InterPro)
Cam10g0169 254 MobiDBLite consensus disorder prediction 22 70 - -
Cam10g0169 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0298 Cam-Chr5:2841698 Cam10g0169 Cam-Chr10:3301644 5.80E-78 dispersed
Cam06g0158 Cam-Chr6:3483999 Cam10g0169 Cam-Chr10:3301644 5.80E-78 dispersed
Cam10g0169 Cam-Chr10:3301644 Cam11g0699 Cam-Chr11:8606729 1.10E-47 dispersed
Cam10g0168 Cam-Chr10:3286195 Cam10g0169 Cam-Chr10:3301644 1.80E-11 tandem
Cam10g0169 Cam-Chr10:3301644 Cam09g1197 Cam-Chr9:13079260 2.10E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0169 - - - 0.0