Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0180 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTCAAGCCGGAGACTCGCCCCGCCGCTCTTCCCGCCGACAATTCCGACATCCTCTTCTCCGCTTCCGAGCCACTTGACGAAACCCTAGGCCATTCCTTCTGCTACGTCCGCTCTTCCAACCGTTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCTCTTCGTTTTTCCCCTCCCCACGAACCGCCACTCGGTTCTAGGACTAGAACTGGCCCGCCGGAGACTGCCTTCAAGGCCATCTCGGGCGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTCTTATGCTTGATGCTGTTTACGACGATGCCAATGACACTACGCTTGGGGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTCTTAATGGCTTTGAGAGTACTTCTTCTTTTACTGCTCTTCCGCTTCAGCCCGTCCCCAGAGGTGGGACTGAGCCTTTGGAACGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCGCTGTCTGGTCCGCTCGATGCTAATGTTGATGGTGCTGGTGCTGGTGGTGCTGGCGCCGGCGCTGGTGGTGGCAGTGGCGGTGGTGGGAGAGTCCATTTCTCCGCTCCGCTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGACCGTGGGTGGTGCCGGTGTTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCACTTGGGAAGGCTGGAGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAAGGGTGGTTGTTCGTTGGAATTTATGATGGGTTCAATGGCCCGGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCCGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGACGATAATGAGGAGGCTGCGGCTGCTGCTAATTCGAACCCTTCGAATGTGGCTGAAGAGAGCACAGTCGGTGCGAACGAAACTAATGCTGACCCGTCCTCAAGAGCCGCTGGTCAAACCGTTGAAACTAACGGGAATGTTTCAGTAGTTGGAAATGAAGCGGAAGTGGAACAACCGGCTGCTGATCGAGGATCAGCAAAGAGGGTTACGTTTCAATCAGAGGATGTACCGGAGAACAGGCGGAGGCGGCGACTGTGGGAGTATTTAGCGGAGGACGATACACAGGACGGACTTGATCTCTCGGGGTCAGATAGGTTTGCATTTTCTGTTGATGACGCTCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGTTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGTTAAGACTTTGTTCCCGTGGAAGTATGGTTTGGGAGATAAAGAGAAGGCTGAGGCTGAGAATAGGGTGGAGGAGACATCATATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCATTGTCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGACATGACAGATAAGTTGCTTGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATCTGGGTGACAGCCGTGCAATTGTAGCACAGTATGAGCAACAAGAAGTTGGGCCTTGTGAAGACATGAAGGAGGTGGGCCTCAAAAGGACGGGCATGGAGGGTATAATTGAGGAGTCTACAACAAGTGAAGGGAAAATAACTCAAACGAATCAACCTTCAGCTCAGACGACGAGATTGACTGCATTGCAGCTATCCACTGATCATAGCACAAGCATTGAAGAAGAAGTAAGAAGAATAAAGAACGAGCACCCTGATGACAAACAGTGCATCGTCAACGATAGAGTGAAGGGCCGTCTAAAGGTTACGAGGGCATTTGGTGCAGGATTTTTGAAACAGCCAAAATTGAATGATGCATTACTGGAAATGTTTCGGAATGAGTATATTGGTACCGCACCATATTTATCATGCTTGCCTTCTCTTCGTCACCATAGACTCTGCCCGACGGATCAATTCATAGTGCTGTCATCTGATGGATTGTATCAATACCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAACTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGATTTTCATGAATTGTTGGACATCCCACAGGGCGATCGAAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2439 48.95 MGSGVSSLFSCLKPETRPAALPADNSDILFSASEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPPLGSRTRTGPPETAFKAISGASVSANSSIPRSVLMLDAVYDDANDTTLGASGGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGAGAGGAGAGAGGGSGGGGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAAAAANSNPSNVAEESTVGANETNADPSSRAAGQTVETNGNVSVVGNEAEVEQPAADRGSAKRVTFQSEDVPENRRRRRLWEYLAEDDTQDGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQEVGPCEDMKEVGLKRTGMEGIIEESTTSEGKITQTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCLPSLRHHRLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3391304 3398067 - CaPI482276_10g001800.1 Cam10g0180 136843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0180 812 SMART PP2C_4 267 798 IPR001932 -
Cam10g0180 812 MobiDBLite consensus disorder prediction 64 88 - -
Cam10g0180 812 PANTHER PROTEIN PHOSPHATASE 2C 275 800 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cam10g0180 812 SUPERFAMILY PP2C-like 279 801 IPR036457 -
Cam10g0180 812 ProSiteProfiles PPM-type phosphatase domain profile. 267 800 IPR001932 -
Cam10g0180 812 CDD PP2Cc 512 800 IPR001932 -
Cam10g0180 812 MobiDBLite consensus disorder prediction 345 374 - -
Cam10g0180 812 Gene3D - 252 807 IPR036457 -
Cam10g0180 812 Pfam Protein phosphatase 2C 633 763 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0908 Cam-Chr4:23194056 Cam10g0180 Cam-Chr10:3391304 2.00E-117 dispersed
Cam05g0706 Cam-Chr5:6202528 Cam10g0180 Cam-Chr10:3391304 4.40E-59 dispersed
Cam10g0180 Cam-Chr10:3391304 Cam10g2036 Cam-Chr10:34200090 2.90E-22 dispersed
Cam10g0180 Cam-Chr10:3391304 Cam02g2088 Cam-Chr2:33749551 2.20E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0180 - - - 0.0