Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g0240 | ATGAATGGATTTTATCAGGGTTCGGTATTCGAAGTATTTCGTCGATTTTTCCCATTTTCGTTCTTCCCCAAGTCGATCGTCATTCCTGTTGATCAATCGCAGCTTCCATCGACTTCTTCTTTTCCGGCTGCCGGGACGGTGGCGACTTCTGTGAGAATTTCGTTATCTGTATTTCTTCCGTCGAGATCTTCTCCGATTTTTCCATTACTGGGGTTTGGTTTAGGAATGAATGTTAGGGGCTTTTTATTTGAGGCTATGTATATTGAGGAACTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGGGTTATTGTTAGTAATTTGGAGAGTCAGAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTACCCGACTTTGCTTTACAATGTTTTTAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTTGATGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACTCTGGTTCCTTCAACTCTATATCGTGATCATGGAATTGATCATCTGACCATTCCGACAAGGGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACGAAAATGCATCACATGGACAGACTACATATGTTCACTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATCTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTATAAGCATGTGAAATCAATCAGGCCAAGGGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCTGATTGTGCAGAAGGATGTTTCCTTCTGCCACATAGATGATCTAGGAAAGGAACTATCAGGATCATCGCATGATCTTATCGCATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTAGATGGATATGACCAAAGTATCAGCCAAAGTGACATGGGTGATATCTGGGCAGATTTAAGTGTGGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAGCACCATAGCCAGAAGATTTCAGGAGATGATCTAGGCGTGGGGAAGGGCTGTTCACTTAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA | 1257 | 43.83 | MNGFYQGSVFEVFRRFFPFSFFPKSIVIPVDQSQLPSTSSFPAAGTVATSVRISLSVFLPSRSSPIFPLLGFGLGMNVRGFLFEAMYIEELKEGELQSGEEGNSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICIAVNFIHENASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHLIVQKDVSFCHIDDLGKELSGSSHDLIAFDDSSVVVVKESDLDGYDQSISQSDMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4176875 | 4181515 | - | CaPI482276_10g002400.1 | Cam10g0240 | 136903 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g0240 | 418 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 147 | 299 | IPR029021 | - | |
Cam10g0240 | 418 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 242 | 252 | IPR016130 | GO:0016311(InterPro) | |
Cam10g0240 | 418 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 153 | 300 | IPR020422 | GO:0006470(InterPro) | |
Cam10g0240 | 418 | Gene3D | Protein tyrosine phosphatase superfamily | 153 | 303 | IPR029021 | - | |
Cam10g0240 | 418 | SMART | dsp_5 | 156 | 297 | IPR020422 | GO:0006470(InterPro) | |
Cam10g0240 | 418 | Pfam | Dual specificity phosphatase, catalytic domain | 193 | 295 | IPR000340 | GO:0016311(InterPro) | |
Cam10g0240 | 418 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 221 | 289 | IPR000387 | GO:0016311(InterPro) | |
Cam10g0240 | 418 | CDD | PTPMT1 | 153 | 295 | IPR044596 | GO:0004721(InterPro) | |
Cam10g0240 | 418 | FunFam | Dual specificity phosphatase domain protein | 153 | 300 | - | - | |
Cam10g0240 | 418 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 86 | 373 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam10g0240 | Cam-Chr10:4176875 | Cam11g0207 | Cam-Chr11:3611765 | 2.10E-80 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g0240 | - | - | - | 0.0 |