Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0240 ATGAATGGATTTTATCAGGGTTCGGTATTCGAAGTATTTCGTCGATTTTTCCCATTTTCGTTCTTCCCCAAGTCGATCGTCATTCCTGTTGATCAATCGCAGCTTCCATCGACTTCTTCTTTTCCGGCTGCCGGGACGGTGGCGACTTCTGTGAGAATTTCGTTATCTGTATTTCTTCCGTCGAGATCTTCTCCGATTTTTCCATTACTGGGGTTTGGTTTAGGAATGAATGTTAGGGGCTTTTTATTTGAGGCTATGTATATTGAGGAACTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGGGTTATTGTTAGTAATTTGGAGAGTCAGAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTACCCGACTTTGCTTTACAATGTTTTTAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTTGATGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACTCTGGTTCCTTCAACTCTATATCGTGATCATGGAATTGATCATCTGACCATTCCGACAAGGGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACGAAAATGCATCACATGGACAGACTACATATGTTCACTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATCTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTATAAGCATGTGAAATCAATCAGGCCAAGGGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCTGATTGTGCAGAAGGATGTTTCCTTCTGCCACATAGATGATCTAGGAAAGGAACTATCAGGATCATCGCATGATCTTATCGCATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTAGATGGATATGACCAAAGTATCAGCCAAAGTGACATGGGTGATATCTGGGCAGATTTAAGTGTGGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAGCACCATAGCCAGAAGATTTCAGGAGATGATCTAGGCGTGGGGAAGGGCTGTTCACTTAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA 1257 43.83 MNGFYQGSVFEVFRRFFPFSFFPKSIVIPVDQSQLPSTSSFPAAGTVATSVRISLSVFLPSRSSPIFPLLGFGLGMNVRGFLFEAMYIEELKEGELQSGEEGNSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICIAVNFIHENASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHLIVQKDVSFCHIDDLGKELSGSSHDLIAFDDSSVVVVKESDLDGYDQSISQSDMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4176875 4181515 - CaPI482276_10g002400.1 Cam10g0240 136903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0240 418 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 299 IPR029021 -
Cam10g0240 418 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311(InterPro)
Cam10g0240 418 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 300 IPR020422 GO:0006470(InterPro)
Cam10g0240 418 Gene3D Protein tyrosine phosphatase superfamily 153 303 IPR029021 -
Cam10g0240 418 SMART dsp_5 156 297 IPR020422 GO:0006470(InterPro)
Cam10g0240 418 Pfam Dual specificity phosphatase, catalytic domain 193 295 IPR000340 GO:0016311(InterPro)
Cam10g0240 418 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 221 289 IPR000387 GO:0016311(InterPro)
Cam10g0240 418 CDD PTPMT1 153 295 IPR044596 GO:0004721(InterPro)
Cam10g0240 418 FunFam Dual specificity phosphatase domain protein 153 300 - -
Cam10g0240 418 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 86 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0240 Cam-Chr10:4176875 Cam11g0207 Cam-Chr11:3611765 2.10E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0240 - - - 0.0