Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0253 ATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAATTTGTATATGCTGGCAACTCTGTTTTTATGAGTTTTCTTATGTCTTTGGGAATTCATCCTTCAACTCTTGTCATCTTCTCTACATTCTCCACTTTTCTCATTGTCTCTCCCATTGCTATTTATTTTGAAAGATATAACTGGCCAAAGAAACTTAGTCTAAAGTTGATTCTTCAGCTTCTTCTCATATCTTTTGGAGGGGTAACATTGTTTCAGTCCCTTTTTCTGAAAGGAATACAGCTAACATCGCCGACTTTAGCGACGGCGATGCCGAATCTCGCCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGGTTGGCGCCTTCACCATGAGCATAATGCACAGAGTGTCATCGGATGCAGCTGCAAAAGACAATATCCCACGAGAATCACCTCCGACTGAGCAAGTGTTCGATGAACAGAAGATCCTCGGTTGTGTGTATCTCTTCTCAGCGATCGTCGTTTTATCTAGCATAGTTGTTTTGCAGGCATCGACACTAGGGGATTTCCCAGCACCGATGTCGTTGTGTGCAATAACGTCTCTCATTGGAGTGCTATTAACCATAGGTGTACAGATAGTTGAATATCAGAAACTGGACATTGGTTGGCCACTTCTCAGTGTTAAGGAATTGGTTGCCTATTTTGTTGTAGGCGGAAGCATTAGCGGCGCTTGCGTGAGCTTCAACGGGTGGGCAATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGCCTCTACTTTGTCCTGTGGGCGAAAGCGAAGGAGCGTTACGCCAACCGAAACCGTCCCGAGAGTGAGTTCGACGTCGACAAGCCTCTTTTAAGTTGA 1038 44.51 MEDFAIMSGLVGVQFVYAGNSVFMSFLMSLGIHPSTLVIFSTFSTFLIVSPIAIYFERYNWPKKLSLKLILQLLLISFGGVTLFQSLFLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLEKVQLSCIYSKIKILGTFLCVVGAFTMSIMHRVSSDAAAKDNIPRESPPTEQVFDEQKILGCVYLFSAIVVLSSIVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIVEYQKLDIGWPLLSVKELVAYFVVGGSISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSLAGMFLMFTGLYFVLWAKAKERYANRNRPESEFDVDKPLLS 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4366707 4368699 + CaPI482276_10g002530.1 Cam10g0253 136916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0253 345 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020(InterPro)
Cam10g0253 345 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Cam10g0253 345 PANTHER WAT1-RELATED PROTEIN 11 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam10g0253 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 149 - -
Cam10g0253 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0253 Cam-Chr10:4366707 Cam10g1234 Cam-Chr10:25757074 2.20E-19 dispersed
Cam01g0419 Cam-Chr1:4613448 Cam10g0253 Cam-Chr10:4366707 7.70E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0253 - - - 0.0