Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0267 ATGCAAAGAAAAATGGGGAAGGGGGAGTTGGAATTTTCAGCCGCTTTTTCTTCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAGAAAGGGGAAGAACAACAAGAACAAGAACAAGAACTAGAAGAAGAACAAGAAGAAGGGCTTTCTTATTTTGTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGCTTCTACTCTCTCTTCTTCCTTTGGTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACTCCTGCTGTTGAACCGGTCGCCGGAACTGGTGTTGGGAACGCCATTTTTCCAGGTGGATTGGAGCGATGTGGGGTTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACAGCCGGCCCAGAACAGTCGTTTCTCCGATGGATCGCCGGAGATGTTGTTGAAGATCCCAGTCTAGGGAGTAAAAGTGTTTTGCAAAATGGGAATATACCCTTTGATTTGGATGGCAATGCCGGTATCGGAATGGTCGATCAGGGTTCAGAATTCGACACCGGTGCTGGTAATGTTCTCGCCAACATTAATCCTAATTTATCGTTTCCTCTTGCTGCTTGTGCTGGGTTTTCTGATGTTAATGTTAACAATAAGTCTCTTAGTAGAAGCACTTGTGGGGGGGTTGTTAATTACAAGAGTTCTAGTTTGGGTTTGAACAATCGCCATGGAAATTTCAATGTTCAGAACCCTATCTTTACTGGTTCTCTTGAAAATCTTGTTGTTCCTGTTTCTGGGATGATTTATCCTCAGCAACTTCAGCCATTTGAGAGTCCTGATGAGAAACCTCAGAATTTGAATACTCAGGTTTTGTTGAACCAACATCAGCAGCCTCAGAACCCTAGTTTTTTTGTGCCATTGACGTTTGGTCAACAGGAACAGCAGCTCCAGCCTCAACTGAAGAGGCACAATTCGAGTGGAGGACTCGACCCCAACCCAAACGGGCAGATCCCGAAGGTTCCGTTTATGGATCCAGGGAATGAGATTTTTCTGAGGAATCATCAGTTGCAAGTGTTGCAACAGCAGCAGCAGCAGCAGCAGCTTGGTTATCCACCGGGTTTGCAGTTTCTTCCTCAGCAGAAGGCAATGTCGCCAAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATCACAATCCCCCACAGCAACAGCATCAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCAGCAGAGCTGGTAGGGACTGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCAGTTAATCCTCCTCCACCTCGCTGCCCGACACCATTTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTCATTCAGTTTGTGAATTTCACCTGCAACCAGGCACTGCTCGAGGCCCTCGATGACGTTGATCGAATTCACATTGTAGATTTCGATATTGGTTTTGGAGCTCAGTGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCGGGGTGCACTGTCACTCAAAATCACTGCTTTTGCCTCTCCCTCCACTCACCATCCAATTGAACTCGGGCTTATGCGTGAAAATCTTACTCAATTTGCTAATGACATTGGAATAAGTTTTGAGTTCGAAGTGGTTAACTTTGATTCTTTGAACCAGAGCTCCTTTCCATTGCCATTTCCTCGAGCAAGCGAAAATGAGGCTATTGCAGTAAACTTCCCTTTATGGTGCTCATCAAATCAGCCAGCGATGCTTCCGTCTCTCCTCCGTTTCATCAAGCAACTCTCACCGAAAATTGTGGTCTCACTGGACCGAGGGTGCGATCGAAGTGACCTTCCATTTCCTCAGCATATGCTTCAGGCCCTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATCAATATGAATTCGGATGCCGTGAACAAGATTGAGAGGTTTCTTTTGCAACCCAGAATTGAAAGCACCGTCCTGGGACGGCTTCGAGCACCTGAAAGAATGCCCCTTTGGAAGACACTCTTTGCCTCTGCTGGGTTTACGCCTGTAACCTTTAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGCCGGGAGCTCATATCTGCTTCAGCTTGGAGGTGTTGA 2340 47.56 MQRKMGKGELEFSAAFSSSSPICSGFAEKWVKKGEEQQEQEQELEEEQEEGLSYFVLPNNEPTSVLHMRSPSPPTSASTLSSSFGGGGGGGGGGCVPSLPPETPAVEPVAGTGVGNAIFPGGLERCGVGLEDLESMWSETAGPEQSFLRWIAGDVVEDPSLGSKSVLQNGNIPFDLDGNAGIGMVDQGSEFDTGAGNVLANINPNLSFPLAACAGFSDVNVNNKSLSRSTCGGVVNYKSSSLGLNNRHGNFNVQNPIFTGSLENLVVPVSGMIYPQQLQPFESPDEKPQNLNTQVLLNQHQQPQNPSFFVPLTFGQQEQQLQPQLKRHNSSGGLDPNPNGQIPKVPFMDPGNEIFLRNHQLQVLQQQQQQQQLGYPPGLQFLPQQKAMSPKPKVVGLGDEMAYHNPPQQQHQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNRGALSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQSSFPLPFPRASENEAIAVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4551672 4554169 - CaPI482276_10g002670.1 Cam10g0267 136930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0267 779 MobiDBLite consensus disorder prediction 1 21 - -
Cam10g0267 779 Pfam GRAS domain family 417 778 IPR005202 -
Cam10g0267 779 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 391 777 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cam10g0267 779 MobiDBLite consensus disorder prediction 31 50 - -
Cam10g0267 779 ProSiteProfiles GRAS family profile. 407 778 IPR005202 -
Cam10g0267 779 MobiDBLite consensus disorder prediction 66 104 - -
Cam10g0267 779 Coils Coil 27 47 - -
Cam10g0267 779 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0310 Cam-Chr6:5179227 Cam10g0267 Cam-Chr10:4551672 3.90E-138 dispersed
Cam07g0926 Cam-Chr7:22889322 Cam10g0267 Cam-Chr10:4551672 7.70E-59 dispersed
Cam10g0267 Cam-Chr10:4551672 Cam11g0755 Cam-Chr11:9384547 2.10E-38 dispersed
Cam10g0267 Cam-Chr10:4551672 Cam07g0925 Cam-Chr7:22823820 4.90E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52693 PF03514 GRAS 2.30E-93 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0267 K27747 - csv:101218630 1330.47