Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0353 ATGGGTTCTTGTCATTCGTCTCCTAAAGGGCGGCAGAACAGAGGCGGCGTTTATTCTGCCGCCGCAGCGCCAGCTGAGGCTCCGACGGCTTCTACAACAGAGTCATTTTCTTCTTCTTCTTCATTTTTGTACTCGACGACCAGTAAGCGGCGTTGGTGGAATAAGAATTCGACTAAAACTTTCGGGGTTGGGGTTTGTTCAGAGAAGGTTCATGAATTTGAGGTTCCGGGGAGGAGTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGATTGTGCAGGAGAATTTCAGTTCAAGAAGAGATACAGTATTTTGTGGGGTATTTGATGGACATGGTCCTTTTGGACATATGGTTGCAAAAAAAGTTCGTGATACTCTCCCTCTAATCCTGTGTACACAATGGACATCTAAATCAAATGAAGATCAAAGCAACCTCTTTAAGACAAGACATTCCCGAAGTTCGAATTCTGAAGCTTCTGTTGCCCTAGATGGAGATGAAGATTCTTACAAGTCATTGGAGGCCGAAGAAAATGAAAAATTCCCCAAAATGTTTCTACCACTCAAAGTATCTTTACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTGCATCCCAAAATTGATTGTTTTTGCAGTGGATCGACGGCCGTGACTCTAATAAAGCAGGGTCAGAACCTTGTACTTGGAAATGTTGGTGACTCAAGAGCAGTGCTGGCTACGATAGACGAAGATAACTCTTTGATTCCAGTTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCTGAAGTTGCACGAGTATGGTTGCCAAATAACGATTCACCTGGTTTGGCGATGGCGAGAGCTTTTGGAGACTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCGCCTTACTGCGAGAGATCAGTTTGTAATTCTTGCCACTGATGGGGTTTGGGACGTTCTTTCGAATAAAGAAGCAATCGAAATTGTAGCATCAGCCCCTTCTCGAGAAACAGCCGCCAGAGCTCTTGTCGACTGTGCTGTTCGTGCATGGAGGCTGAAATATCCTACATCCAAGAATGACGATTGTGCTGTTGTATGTCTCTTTCTTGAGTATGAGCCTGAAGTAGAAGAAAACACGGAAACTTGTGCAAAACCCGTGGAAGAAGTTCTGGCCATGCTGAGCGAGGACGCAAAGGACATTGAAGTTGATTCTGATGATCGTAGAACGACTGTTGTCGAGCAGTCAGGCACTCTACAAAACTCTAATGAGATTGTACCTGTCTCCGACTCAACGGATGAGAAGGTGGCAGCTGGAGGCCGAAACCCATCGAAGAGAAGCTTAGCTGAGTGCATTTCAAGTGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTCTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAGTGGCTATGA 1581 45.03 MGSCHSSPKGRQNRGGVYSAAAAPAEAPTASTTESFSSSSSFLYSTTSKRRWWNKNSTKTFGVGVCSEKVHEFEVPGRSCSNGSSRIACLYTQQGKKGVNQDAMIVQENFSSRRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNEDQSNLFKTRHSRSSNSEASVALDGDEDSYKSLEAEENEKFPKMFLPLKVSLLKSFKLMDKELKLHPKIDCFCSGSTAVTLIKQGQNLVLGNVGDSRAVLATIDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRRLTARDQFVILATDGVWDVLSNKEAIEIVASAPSRETAARALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPEVEENTETCAKPVEEVLAMLSEDAKDIEVDSDDRRTTVVEQSGTLQNSNEIVPVSDSTDEKVAAGGRNPSKRSLAECISSEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWL 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5720285 5729158 - CaPI482276_10g003530.1 Cam10g0353 137016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0353 526 MobiDBLite consensus disorder prediction 1 21 - -
Cam10g0353 526 Pfam Protein phosphatase 2C 192 383 IPR001932 -
Cam10g0353 526 FunFam probable protein phosphatase 2C 33 82 408 - -
Cam10g0353 526 Gene3D - 77 407 IPR036457 -
Cam10g0353 526 SMART PP2C_4 76 403 IPR001932 -
Cam10g0353 526 ProSiteProfiles PPM-type phosphatase domain profile. 87 405 IPR001932 -
Cam10g0353 526 CDD PP2Cc 86 405 IPR001932 -
Cam10g0353 526 PANTHER PROTEIN PHOSPHATASE 79 404 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam10g0353 526 SUPERFAMILY PP2C-like 82 406 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0128 Cam-Chr2:2429839 Cam10g0353 Cam-Chr10:5720285 5.90E-102 dispersed
Cam05g1941 Cam-Chr5:28352637 Cam10g0353 Cam-Chr10:5720285 5.80E-75 dispersed
Cam06g0487 Cam-Chr6:6979581 Cam10g0353 Cam-Chr10:5720285 5.80E-83 dispersed
Cam10g0353 Cam-Chr10:5720285 Cam11g0973 Cam-Chr11:16193590 7.20E-131 dispersed
Cam10g0353 Cam-Chr10:5720285 Cam02g1797 Cam-Chr2:31062390 5.70E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0353 - - - 0.0