Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0365 ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCGATTGAGAAGTGAAGCACAGCCACCATTTCCAGCTTGCCATTTGCAGTTGCCCACTTCAATGAGCACACAGAGATTGGATTTGCCCTGCAGCTTTTCCCGTTCTAAAGACACCTCTGCCACTGCCCGATCCCCGTCAATCCGCCCGGTTGCGCTCTCCGTCGAGAAGCAGAACATCAGGCTCCCGCCGTTATCCGCCACCAACCAGCAGATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGTTTGATGATGATGATTCTTCCATTAACAGCGCCAAGAGGAAGAGAGAGTGCAGAGACGACGCCGGAGATGGACTAATTCTAAGCCAATTCGGCGGTGGGGGTGGGAGTTTCTGGTTTCATCAGCCTGATGGGGATGAAGAAGGAATCTGTTTTCTTCCTGGAAGTGAAGTAATTTCTTCACCATCGCCGTTTTTTTCAGAGATCGCCGACTTCGGAGAAGGAAATGATGGAGAAAGCAGCCATGTAAAGGCTCAGGAAGGCTCCGGTTCGGGTTCAGGGTCGAGTTCATCATCAGAAAGTGAGAGATTTGCATTAAGAAGCAGAGTAACAACAGAGAATGTTTCAGCAGCAGCAACAACAGTGCCAGAAATTGGGAATGGAAGCTCAAGAAATCCTTCATATCATCACCATCAAGGTTCTGGTTTAGAGAATGAAAGGGAAGAAGAAGAAGGGTTTGAGCTGATAAGTCTTCTAATGGCATGTGTAGAAGCAATTGGATCAAAGAACATTGGTTTGATTAACCATTTGATAGATAAACTTGGGAGTCAAGCTTCACCAAGAGGCTCATCACCAATTACACGTTTGATTGCATATTACACAGAGGCTTTAGCAGTTAGAGTGAGCAGAGTTTGGCCACAGGTTTTTCACATAACAACACCAAGGGAATACGATCGGATGGAGGACGATACGGGGACAGCACTACGGCTGCTAAACGAGGTGAGCCCGATCCCGAAATTCATCCACTTCACAGCAAATGAGATGTTGCTAAGAGCATTTGAAGGGAAAGACAGGGTTCACATCATAGACTTTGACATAAAGCAAGGGCTGCAATGGCCAAGCTTGTTCCAAAGTTTGGCATCTAGAACAAACCCTCCAAGTCATGTGCGAATCACTGGGATCGGTGAGTCAAAGCAGGAATTGAACGAAACGGGAGATAGGCTAGCAGGGTTCGCCGAGGCATTGAGGCTGCCGTTCGAGTTTCATGCCGTGGTGGACCGGTTGGAGGATGTGAGACTGTGGATGCTTCATGTCAAGGAGCAAGAAAGTGTAGGAGTGAATTGCATGCTCCAACTTCACAAGACACTGTACGATGGCAATGGAGGAGCATTGAGGGACTTTTTGGGGCTCATAAGAAGCACAAACCCAAGTATTGTTGTCATGGCTGAGCAAGAAGCTGAGCACAACGAACCGAGGTTAGAGAGTCGAGTTACAGCCACATTGAAGTACTACGCTGCCATATTCGATTCCCTCGATGCTAGTCTTCCACCCGATAGCTCAGCCAGGTTGAAAATTGAGGACATGTTTGGGAGGGAGATAAGGAACATGATAGCATGTGAAGGAAGGGAGAGATATGAAAGACATGTTGGATTTAAGAAATGGAAGAAGGATATGGAGCAGCAAGGAGGTCTGCAATGCGTCGGGATTTGCGACGATCGAGAGCTTCTTCAGACTCAATTCCTCTTGAAAATGTACTCATCAGCTCATGGATTCAAGGTCACAAAGATTGAAGAAGAAGAAGGAGCAGCTCAAGCAATTTGCCTAACTTGGGAAGATCAGCCACTTTACTCTGTCTCAGCTTGGTCAGCAGCAGAAGTTTCTGGAAGTTCATCTTCATTTAACCATCCAACTTCTTGA 1953 46.85 MLAGCSSSTLLSPRNRLRSEAQPPFPACHLQLPTSMSTQRLDLPCSFSRSKDTSATARSPSIRPVALSVEKQNIRLPPLSATNQQIKQEFWNGKGKNLKRIAEQVGFDDDDSSINSAKRKRECRDDAGDGLILSQFGGGGGSFWFHQPDGDEEGICFLPGSEVISSPSPFFSEIADFGEGNDGESSHVKAQEGSGSGSGSSSSSESERFALRSRVTTENVSAAATTVPEIGNGSSRNPSYHHHQGSGLENEREEEEGFELISLLMACVEAIGSKNIGLINHLIDKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHITTPREYDRMEDDTGTALRLLNEVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKEQESVGVNCMLQLHKTLYDGNGGALRDFLGLIRSTNPSIVVMAEQEAEHNEPRLESRVTATLKYYAAIFDSLDASLPPDSSARLKIEDMFGREIRNMIACEGRERYERHVGFKKWKKDMEQQGGLQCVGICDDRELLQTQFLLKMYSSAHGFKVTKIEEEEGAAQAICLTWEDQPLYSVSAWSAAEVSGSSSSFNHPTS 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5912961 5914913 + CaPI482276_10g003650.1 Cam10g0365 137028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0365 650 MobiDBLite consensus disorder prediction 1 22 - -
Cam10g0365 650 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 232 633 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cam10g0365 650 MobiDBLite consensus disorder prediction 1 16 - -
Cam10g0365 650 MobiDBLite consensus disorder prediction 169 253 - -
Cam10g0365 650 Pfam GRAS domain family 261 633 IPR005202 -
Cam10g0365 650 MobiDBLite consensus disorder prediction 187 244 - -
Cam10g0365 650 ProSiteProfiles GRAS family profile. 251 634 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0365 Cam-Chr10:5912961 Cam11g0755 Cam-Chr11:9384547 8.20E-68 dispersed
Cam10g0365 Cam-Chr10:5912961 Cam01g1990 Cam-Chr1:33163736 1.50E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52699 PF03514 GRAS 6.50E-122 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0365 K27749 - csv:101209060 1132.86