Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0380 ATGGAGTTTTCTTATATTTCTCCATTGCTCTTGTTTTTCTTTTTGCTTCAAACATCTGCCATTCCTACCAAAAAGTCTTACATTGTTTATTTGGGATCGCACTCGTTCGGACCGAACCCTTCAAGATATGATGTCCAACGTGCAACCGAGTCCCAATATGATATATTAGGATCAGTCACGGGAAGCAAATTGGCAGCCAAAGAATCAATTATGTATTCCTACAATAGATACATTAATGGTTTTGCTGCCGTACTTGATGAAAAAGAAGCCATGGCTCTTGCGAAGAATCCAAACGTGGTGTCGGTTTTTGAGAACAAGGAAAGAAAATTGCATACAACACGATCGTGGAATTTTCTTGGGGTGGATAGTGACGCAGGAATTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTTGGGGAAGATACAATTATAGGCAACCTTGACACGGGTGCTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGTCCTATTCCTTCAAGGTGGAAGGGAGCTTGTGAAGGTGGCGCCAACTTTCGTTGCAATAGGAAGTTGATTGGAGCAAGATATTTCTACCAAGGATTTGCAATGTCAAAAGGTCCTCTCAATGTTAGTTTCAATAGTGCAAGAGACCAAGAAGGCCATGGTTCACACACTTTGTCCACAGCCGGAGGCAACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTCTTGCTGCCTACAAGGTTTGCTGGCCTTCATCTAGTGGCGGCTGTTTCGATGCTGATATCCTAGCCGGTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTACCGCAGCTCAAGAGTTTGCTTATGACGCCGTTTCGATAGGGGCATTCCATGCCGTTCAACAAGGAATTGTTGTGGTTTGCTCGGGTGGAAATGATGGCCCGGCTCCTGGAACTATAAGCAATGTTTCTCCTTGGATGTTCACTGTTGCAGCTAGTTCCATCGATCGAGACTTTGTCAGTTATGTCGCTCTCGGAAACAAGAAGCATATCAAGGGTTCAAGTCTTTCATCTAGTGGATTGCCGAGTGGTAAGTTCTACCCTTTGATAAATGGTGCGGAAGCAAAAGCTGCCAATGCCACTGATAATCTTGCACAGCTTTGCTTGGAGGGATCACTTGATCCCAGAAAAGCAAAAGGAAAGATTATAGTTTGCCTTCGAGGAGAAAATGGAAGAGTGGAGAAAGGTTTCGTTGTTCTTAAAGCTGGTGGCGCCGGTATGATTTTGGTGAATGACAAGCAACACGGATCAGGCACTTTGGCCGATCCCCATATAGTTCCTGCTGTTCATATAAGCTACACCGATGGTCTTTCTATCGCTCAATATATTAACTCCACCAAGGCACCCATTGCTCACATAACCCATGTAAGGACTGAGGTAGGAATTAAACCATCACCTGTCATGGCTGACTTCTCATCAAGAGGCCCTAATTCCATCACAGAAGCCACGCTCAAGCCTGATATAACAGCGCCAGGAGTTAGTATAATCGCATCGGTCACGACAGATGTAACTGCAACACAATTGCCGTTTGATAAGCGTCGGGTGCCTTTCAGCGTTGAATCCGGCACTTCGATGTCTTGCCCACACATCTCAGGTGTTGTTGGCCTTTTGAAGACCCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCTGCCATCATGACTACAGCAAAAACAAGAGACAACACCCAGCAAACAATATTGAACAGCAACAAAGTGAAGGCAACCCCATTTGATTATGGTGCAGGACATGTCCATCCCAACAATGCAATGGACCCTGGCCTCGTTTATGACACGACCATTGACGACTACTTGAACTTCTTATGTGCACGAGGCTACAATGCCCTAGCTCTCAAGAAGTTCTATAACAAACCATTTGTCTGCGCCAAATCATTCGCAATCACAGATCTTAACTACCCATCAATCTCGGTCCCAGAGTTGCGAACCGGCGCCCCGGTAACGGTCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTACGTAGCAAGGGTGAAGGTGTCCTCGAAGGTTTCAGTTTCAGTCGTGCCGAGTACGTTGCAGTTTAATAGTGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCAATACAAAGGACAAGGAAAAGGTGAAGGCCATGTGTTTGGGACATTAATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTCTTGCGGTGAAACTGGGATGA 2298 45.91 MEFSYISPLLLFFFLLQTSAIPTKKSYIVYLGSHSFGPNPSRYDVQRATESQYDILGSVTGSKLAAKESIMYSYNRYINGFAAVLDEKEAMALAKNPNVVSVFENKERKLHTTRSWNFLGVDSDAGIPPNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPIPSRWKGACEGGANFRCNRKLIGARYFYQGFAMSKGPLNVSFNSARDQEGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARLAAYKVCWPSSSGGCFDADILAGFEAAISDGVDVLSVSLGTAAQEFAYDAVSIGAFHAVQQGIVVVCSGGNDGPAPGTISNVSPWMFTVAASSIDRDFVSYVALGNKKHIKGSSLSSSGLPSGKFYPLINGAEAKAANATDNLAQLCLEGSLDPRKAKGKIIVCLRGENGRVEKGFVVLKAGGAGMILVNDKQHGSGTLADPHIVPAVHISYTDGLSIAQYINSTKAPIAHITHVRTEVGIKPSPVMADFSSRGPNSITEATLKPDITAPGVSIIASVTTDVTATQLPFDKRRVPFSVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTQQTILNSNKVKATPFDYGAGHVHPNNAMDPGLVYDTTIDDYLNFLCARGYNALALKKFYNKPFVCAKSFAITDLNYPSISVPELRTGAPVTVNRRVKNVGTPGTYVARVKVSSKVSVSVVPSTLQFNSVGEEKAFKVVFQYKGQGKGEGHVFGTLIWSDGKHFVRSPLAVKLG 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6082266 6089796 + CaPI482276_10g003800.1 Cam10g0380 137043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0380 765 CDD Peptidases_S8_3 109 586 IPR034197 -
Cam10g0380 765 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cam10g0380 765 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Cam10g0380 765 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Cam10g0380 765 Pfam PA domain 376 468 IPR003137 -
Cam10g0380 765 Gene3D Peptidase S8/S53 domain 141 633 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g0380 765 Pfam Subtilase family 141 598 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam10g0380 765 SUPERFAMILY Subtilisin-like 110 624 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g0380 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
Cam10g0380 765 Gene3D - 345 489 - -
Cam10g0380 765 SUPERFAMILY PA domain 404 475 IPR046450 -
Cam10g0380 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Cam10g0380 765 SUPERFAMILY Protease propeptides/inhibitors 25 108 - -
Cam10g0380 765 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
Cam10g0380 765 FunFam Subtilisin-like protease SBT5.3 16 111 - -
Cam10g0380 765 FunFam Subtilisin-like protease SBT1.5 141 358 - -
Cam10g0380 765 CDD PA_subtilisin_like 351 482 - -
Cam10g0380 765 ProSiteProfiles Serine proteases, subtilase domain profile. 115 620 - -
Cam10g0380 765 FunFam Subtilisin-like protease SBT1.5 637 765 - -
Cam10g0380 765 FunFam subtilisin-like protease SBT1.5 345 489 - -
Cam10g0380 765 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Cam10g0380 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 760 IPR045051 -
Cam10g0380 765 Coils Coil 379 399 - -
Cam10g0380 765 Gene3D - 637 764 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0835 Cam-Chr7:20903236 Cam10g0380 Cam-Chr10:6082266 1.20E-134 dispersed
Cam10g0380 Cam-Chr10:6082266 Cam10g0382 Cam-Chr10:6110196 0.00E+00 dispersed
Cam10g0380 Cam-Chr10:6082266 Cam10g0381 Cam-Chr10:6094385 0.00E+00 tandem
Cam05g1721 Cam-Chr5:25713111 Cam10g0380 Cam-Chr10:6082266 1.80E-154 transposed
Cam08g1518 Cam-Chr8:21388286 Cam10g0380 Cam-Chr10:6082266 1.90E-150 transposed
Cam10g0380 Cam-Chr10:6082266 Cam02g0319 Cam-Chr2:3945034 8.60E-250 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0380 - - - 0.0