Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0382 ATGGGAAGCAAATTGGCAGCCAAACGATCAATTATCTACTCGTATAATAGATACATTAATGGCTTTGCTGCCGTACTCGACGAAAAGGAAGCCACAGCTCTTGCAAAGGATCCAAGTGTGGTGTCGGTTTTTGAAAACGAGGAAAGAGATTTGCATACAACAAGATCATGGAATTTTCTTGGAGTGGAGAGTGATGAAGAAATAATTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTTGGCGAAGATACAATTATAGGCAACCTTGATACAGGTGTTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGCCCTGTTCCTTCAAGGTGGAGAGGAGCTTGTGAAGGTGGAGCCAACTTCAGTTGTAATAGGAAATTGATTGGAGCACGATATTTCTATCAAGGAGTTGTAAGTGCAAAGGGGCTTCTCAACAATACCTTCAACACTGCACGAGACCGTGGAGGCCATGGATCCCACACTCTGTCCACAGCCGGCGGCAACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTGTTGCTGCCTACAAGGTTTGCTGGCCTGCCCCTAATGGCGGCTGTTTCGATGCTGATATCCTAGCCGCTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTGGAAGAGCTCAAGAGTTTTCTCGTGACCCCATTTCGATAGGGGCCTTCCATGCTGTCCAACAAGGAATTGTTGTGGTTTGCTCGGGAGGAAATAAAGGTCCAACTCCTCAGACTGTAAGCAATATTTCCCCCTGGAAATTCACTGTCGCAGCTAGTTATTCCGACCGAAGCTTCACCAATTATGTAGTCCTCGAAAACAAGAAGCATTTTAAGGGTCCAAGTCTTTCATCTGGAGAATTGCCAGAGGGTAAGTTCTACCCATTGATGAATGCTGTTGAAGCAAAAGCTGCAAATGCCTCTGATAACCTTGCCCAAATTTGCGAGTACGGATCACTTGATCCTACAAAGGCAAAAGGGAAGATTATAGTTTGTCATCTAGGAGACAATTCAAGAATTGATAAGGGTTTCGAGGTTGTTCGTGTTGGTGGTGTTGGTATGATTATTGTAAATGACAAGAAAGATGGAAGTAACCTTAATATCGATCTCCACATACTTCCTGCTTCTCATTTAAACTATGAAGATGGACTTTCAATTGCTCAATATATGAATTCCACCAAAACACCCATGGCTTTCATAACACATGTAAGAACTGAGTTGGGAATTAAACCATCACCTGCCATGGCTGGATTCTCATCAAAAGGCCCTAATCCCATCACAGACTCCATGATCAAGCCTGATATAACAGCACCGGGAGCAAGTATAATTGCATCGTCCACAGAAGATGTAATGGCAACAAAATCTCAATTCGATACCCGTCGAGTGCCTTTTAATGTTCAATCTGGAACTTCTATGGCTTGCCCACACATCTCGGGTGTTGTTGGCCTTCTCAAGACCCTTTACCCTACATGGAGTCCTGCAGCTATCAAATCTGCTATCATGACTACAGCAAATACAAGAGACAACACCATGCATCCAATATTGGACTCTGACAACTTAGAGGGAACCCCATTTGATTATGGTGCAGGACATGTTAATCCTAACAATGCAATAGACCCCGGTCTCGTTTACGATACGACCATTGATGACTACTTGAACTTCTTATGTGCTTGGGGCTACAACTACACCCAACTCAAGAAATTCTCTAACAAGCCATTTGTTTGCGCCGAATCATTCGCAATCACAGATCTCAACTACCCATCGATCTCAGTTCCGAAGTTGACAATCGATGCCCCAGTGACGATCAATAGAAGAGTTAAAAATGTGGGAAGTCCAGGATCGTATGTGGCGCAAGTGAAGGTGCCTGAGGGAGTTGCGGCTACGGTCGAGCCGAATACGTTGCAATTTAACAATGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCGATACATAGGACAAGGACAACGTCAAGGCTATGTGTTTGGGACATTAGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAATGAAATTGGGATGA 2124 44.68 MGSKLAAKRSIIYSYNRYINGFAAVLDEKEATALAKDPSVVSVFENEERDLHTTRSWNFLGVESDEEIIPPNSIWKAARFGEDTIIGNLDTGVWPESKSFNDAGYGPVPSRWRGACEGGANFSCNRKLIGARYFYQGVVSAKGLLNNTFNTARDRGGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARVAAYKVCWPAPNGGCFDADILAAFEAAISDGVDVLSVSLGGRAQEFSRDPISIGAFHAVQQGIVVVCSGGNKGPTPQTVSNISPWKFTVAASYSDRSFTNYVVLENKKHFKGPSLSSGELPEGKFYPLMNAVEAKAANASDNLAQICEYGSLDPTKAKGKIIVCHLGDNSRIDKGFEVVRVGGVGMIIVNDKKDGSNLNIDLHILPASHLNYEDGLSIAQYMNSTKTPMAFITHVRTELGIKPSPAMAGFSSKGPNPITDSMIKPDITAPGASIIASSTEDVMATKSQFDTRRVPFNVQSGTSMACPHISGVVGLLKTLYPTWSPAAIKSAIMTTANTRDNTMHPILDSDNLEGTPFDYGAGHVNPNNAIDPGLVYDTTIDDYLNFLCAWGYNYTQLKKFSNKPFVCAESFAITDLNYPSISVPKLTIDAPVTINRRVKNVGSPGSYVAQVKVPEGVAATVEPNTLQFNNVGEEKAFKVVFRYIGQGQRQGYVFGTLVWSDGKHFVRSPIAMKLG 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6110196 6118527 + CaPI482276_10g003820.1 Cam10g0382 137045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0382 707 CDD PA_subtilisin_like 293 424 - -
Cam10g0382 707 Gene3D - 579 706 - -
Cam10g0382 707 CDD Peptidases_S8_3 51 529 IPR034197 -
Cam10g0382 707 Pfam Fibronectin type-III domain 607 703 IPR041469 -
Cam10g0382 707 FunFam subtilisin-like protease SBT1.5 287 431 - -
Cam10g0382 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 702 IPR045051 -
Cam10g0382 707 Pfam Peptidase inhibitor I9 7 52 IPR010259 -
Cam10g0382 707 Gene3D - 287 431 - -
Cam10g0382 707 FunFam Subtilisin-like protease SBT1.5 83 312 - -
Cam10g0382 707 ProSiteProfiles Serine proteases, subtilase domain profile. 56 562 - -
Cam10g0382 707 FunFam Subtilisin-like protease SBT1.5 579 707 - -
Cam10g0382 707 Gene3D Peptidase S8/S53 domain 83 575 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g0382 707 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Cam10g0382 707 PRINTS Subtilisin serine protease family (S8) signature 81 100 IPR015500 -
Cam10g0382 707 PRINTS Subtilisin serine protease family (S8) signature 154 167 IPR015500 -
Cam10g0382 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Cam10g0382 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 52 IPR037045 -
Cam10g0382 707 SUPERFAMILY Subtilisin-like 51 566 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g0382 707 Pfam PA domain 331 410 IPR003137 -
Cam10g0382 707 SUPERFAMILY PA domain 330 425 IPR046450 -
Cam10g0382 707 Pfam Subtilase family 81 537 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0380 Cam-Chr10:6082266 Cam10g0382 Cam-Chr10:6110196 0.00E+00 dispersed
Cam10g0382 Cam-Chr10:6110196 Cam10g0384 Cam-Chr10:6132975 5.60E-272 dispersed
Cam10g0381 Cam-Chr10:6094385 Cam10g0382 Cam-Chr10:6110196 1.9e-310 tandem
Cam10g0382 Cam-Chr10:6110196 Cam10g0383 Cam-Chr10:6123410 3.80E-260 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0382 - - - 0.0