Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0388 ATGCCTTACATTGTTTATTTGGGGTCACATTCTCACGGTTCGAGTTCTTCGTCGTTAGATCATCGACGTGCAACCGTGTCTCATTATGATTTATTGGGATCAGTGTTAGGAAGCAAAAAGATAGCCAAAGAAGCTATTTTGTACTCATACAACAAGAACATCAATGGCTTTGCTGCCATGCTTGATGAAAAGCAAGCAGCAGATGTTGCAAAATTTCCGAATGTTGTTTCGGTTTTCGAAAGTCAAGCAAAAAAATTACATACAACACAATCATGGCACTTCCTTGGAATAGAAAAACATGAAGAAATTCCTTTCAACTCCATTTGGAATGCTGCAAAATTTGGTGATGATATAATCATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAATGATGAAGGGTATGGACCTGTCCCCTCAAGGTGGAAGGGAACTTGTCAAAGTGATGCAGACCCCAAGTTCCATTGTAACAGAAAATTGATTGGATCAAGATTCTTCAACATAGGCTATGGTGAACTTAGTGCTACCTTCAATTCTTCAAGAGACAATGTAGGCCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTTGTCTCTGGAGCTAATGTTTTGGGAATGGGGAACGGAACTATTAAAGGTGGCTCCCCTCGAGCCCGTGTAGCGTCCTACAAGGTTTGTTGGCCAGAAGAAAATGGCGAGTGTTTGGACCCAAATACCTTAGCTGCTTTTGAAGCTGCAATTGGCGATGGCGTTGATGTTATCTCAATTTCTGTCGGTGGAGAGCCAAAGGAGTTTTTTAGTGATGCACTCTCTGTAGGAGCTTTCCATGCAGTTGAGCGAGGTATTGTTGTTGTTTGCTCGGCTGGGAACATCGGACCAACTCCTGGGACCGTATCAAATGTGTCGCCATGGATTATAACTGTTGGCGCTAGTTCCATCAATAGGGATTTCACCAATTTTGTGGTCCTGGGGAACAAGAAGAAACTCAAGGGCACAAGCTTTTCTTCTAAGGCAATGCCATTTAACAAGTTCTACCCTCTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCCAATAGTGATGCGGAAGTTTGTGAGGAGGGCTCGCTTGATCCCATGAAGTTAACAGGGAAGATTGTGATTTGCCTTCGAGGGGGTCTTCCAAGAGTGTCTAAGGGTTATGTAGCTGCCAAGGCAGGGGCTGTTGGAATGATTTTGGTTAACGATGAGGAAAGTGGGAATGCAATTTTAACTGATATACATATCCTTCCAGCTTCCCATGTAACCTATAATGACAGCATATCCATCTTCCAGTACATCAATTCTACAAAGACACCAACGGCTTACATTAGTTCTGTGATGACAGAACTGGAAATCAAACCATCCCCAGTAATGGCTGATTTCTCATCAAGAGGCCCCAATACAATAGAGGAGTCAATCCTTAAGCCTGATATAACAGCTCCAGGTGTGAATATACTGGCGGCTTACCCCGATGGAGTACCATTGACAGAACTACCATTGGACAATCGTCAAGCTCCTTTCAAGGTAGATTCTGGCACATCCATGGCCTGTCCCCATGTTGCTGGCATTGTAGGCCTTCTCAAAATCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACGACAGCCAAAACAACGGACAACAGTTTACATCCAATTATGGACTCCACAGGACTCAAAGCAACTCCATTGGCATACGGTGCAGGACATGTTAATCCAAACAGTGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTCAATTTCTTGTGTGCTCGAGGCTACAATGCAACACAAATCAAGAAAATATCCAAGAAGACCTTCGTTTGCGATGGATCGTTCAAAGTGACGGATTTGAATTACCCTTCGATCTCAGTTATAGATCTGAAAATGGGACTTGTGACGATCAATCGAAAAGTGAAGAATGTGGGAAGTCCGGGGATGTATGTCGCTCGAGTGAAGGCGCCACTGGAAGTTTCTATCATCGTTGAGCCAAGTAGATTGCATTTTACGGCCATGGATGAAGAGAAGAGCTTCAAGGTCGTGTTGAATAGCAGTGGAAAGGGCAACGAACAAGGTTATGTGTTTGGGGAATTAGTATGGTCTGATGGCAAACACCATGTTAGGAGTCCAATTGTTGTGAATTTAGGGGAATAG 2220 43.69 MPYIVYLGSHSHGSSSSSLDHRRATVSHYDLLGSVLGSKKIAKEAILYSYNKNINGFAAMLDEKQAADVAKFPNVVSVFESQAKKLHTTQSWHFLGIEKHEEIPFNSIWNAAKFGDDIIIANFDTGVWPESKSFNDEGYGPVPSRWKGTCQSDADPKFHCNRKLIGSRFFNIGYGELSATFNSSRDNVGHGTHTLSIAGGNFVSGANVLGMGNGTIKGGSPRARVASYKVCWPEENGECLDPNTLAAFEAAIGDGVDVISISVGGEPKEFFSDALSVGAFHAVERGIVVVCSAGNIGPTPGTVSNVSPWIITVGASSINRDFTNFVVLGNKKKLKGTSFSSKAMPFNKFYPLINAVDAKANNVSNSDAEVCEEGSLDPMKLTGKIVICLRGGLPRVSKGYVAAKAGAVGMILVNDEESGNAILTDIHILPASHVTYNDSISIFQYINSTKTPTAYISSVMTELEIKPSPVMADFSSRGPNTIEESILKPDITAPGVNILAAYPDGVPLTELPLDNRQAPFKVDSGTSMACPHVAGIVGLLKILNPKWSPAAIKSAIMTTAKTTDNSLHPIMDSTGLKATPLAYGAGHVNPNSAMDPGLVYDITIDDYLNFLCARGYNATQIKKISKKTFVCDGSFKVTDLNYPSISVIDLKMGLVTINRKVKNVGSPGMYVARVKAPLEVSIIVEPSRLHFTAMDEEKSFKVVLNSSGKGNEQGYVFGELVWSDGKHHVRSPIVVNLGE 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6196927 6202049 - CaPI482276_10g003880.1 Cam10g0388 137051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0388 739 Gene3D - 319 463 - -
Cam10g0388 739 FunFam subtilisin-like protease SBT1.5 319 463 - -
Cam10g0388 739 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Cam10g0388 739 PRINTS Subtilisin serine protease family (S8) signature 115 134 IPR015500 -
Cam10g0388 739 PRINTS Subtilisin serine protease family (S8) signature 186 199 IPR015500 -
Cam10g0388 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 87 IPR037045 -
Cam10g0388 739 Pfam Subtilase family 115 566 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam10g0388 739 Pfam Peptidase inhibitor I9 3 87 IPR010259 -
Cam10g0388 739 SUPERFAMILY PA domain 378 449 IPR046450 -
Cam10g0388 739 ProSiteProfiles Serine proteases, subtilase domain profile. 91 594 - -
Cam10g0388 739 Gene3D - 611 737 - -
Cam10g0388 739 Gene3D Peptidase S8/S53 domain 117 607 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g0388 739 CDD Peptidases_S8_3 84 560 IPR034197 -
Cam10g0388 739 FunFam Subtilisin-like protease SBT1.5 611 738 - -
Cam10g0388 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 734 IPR045051 -
Cam10g0388 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Cam10g0388 739 Pfam PA domain 367 438 IPR003137 -
Cam10g0388 739 SUPERFAMILY Subtilisin-like 86 598 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g0388 739 CDD PA_subtilisin_like 326 456 - -
Cam10g0388 739 Pfam Fibronectin type-III domain 639 735 IPR041469 -
Cam10g0388 739 FunFam Subtilisin-like protease SBT5.3 1 87 - -
Cam10g0388 739 FunFam Subtilisin-like protease SBT1.5 117 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0383 Cam-Chr10:6123410 Cam10g0388 Cam-Chr10:6196927 3.30E-265 dispersed
Cam10g0384 Cam-Chr10:6132975 Cam10g0388 Cam-Chr10:6196927 1.10E-286 dispersed
Cam10g0388 Cam-Chr10:6196927 Cam10g1878 Cam-Chr10:32797300 2.20E-141 dispersed
Cam10g0387 Cam-Chr10:6187817 Cam10g0388 Cam-Chr10:6196927 1.20E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0388 - - - 0.0