Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0395 ATGGCTTCCACGGCAGAGGAAACAACAATCACTTCTTCCGACGATGCCGCCACCGCCCAAGAACAACACTATGCTTATGCTATGCAACTGGCTACCTTATCGGTGGTGCCGATGACACTCCAAGCAGCCTTCGAGCTCGGCGTGTTTGAGATCTTGGCCAAGGCCGGGAACGGGGCCGAGCTCTCTCCGACAGAGATAGCGGCCGAGATAACCACGACAAACCCCGAAGCGGCGGCGATGATTGATCGGATGTTGAGGCTTCTAGCGAGCCACTCGGTGGTGGGATGCTCTTTGGCCTTTGATGAAGATGGGAATGTGCAAAGAGTTTATAGCCTTACGCCGGTTTCAAAGTATTATGTTCGTAACGAAGATGGTGTCTCATTAGGTCCACTTTTAACATTGCTTCAAGATAAAATCCTTCTCCATACCTGGAGTGAGCTGAAGAATGCAATTATTGAAGGAGGAGGTGTTTTCAGTAGGGCTTATGGGGGAGTTCATGCCTTTGAATACCTTGGTTTGGATCCAAGATTTAACCAAATTTTCAACACTGCAATGATAAATCACACCACTATGCCCATCAAAAAAATTGTTGAATCCTACAAAGGCTTTGCAAACATCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAGTCATCACTTCTACATATCCTTTCATCAAAGCTATCAACTTCGACTTACCTCATGTCATTCGCGATGCCCCTCCCTATCCTGGTGTAGAACATGTGGGAGGAGACATGTTTGAGAAAGTTCCAAAGGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGATGATCATTGTATAAAGTTGTTGAAAAATTGCTACGATGCGATCCCAAATGATGGAAAGGTAATCATAGTGGACTCGATACTTCCAACATTGCCTGAGACCACAAGTGCAACAAAAGCCGTGGCCCAATGCGATATGGTTGAGATGACTCTATATCAAGGAGGGAAGGAGCGAAGTGGAGATGAATTCAAGGCCCTCGCAACCAAAGCTGGATTTAAACATGTCGTATTCCAATGCCTTGTATCCAATCTCTGGGTTATAGAGTTTCTTAAAGATTTTATACCACACCAAGGTTGA 1128 45.66 MASTAEETTITSSDDAATAQEQHYAYAMQLATLSVVPMTLQAAFELGVFEILAKAGNGAELSPTEIAAEITTTNPEAAAMIDRMLRLLASHSVVGCSLAFDEDGNVQRVYSLTPVSKYYVRNEDGVSLGPLLTLLQDKILLHTWSELKNAIIEGGGVFSRAYGGVHAFEYLGLDPRFNQIFNTAMINHTTMPIKKIVESYKGFANIKQLVDVGGGLGVTLQVITSTYPFIKAINFDLPHVIRDAPPYPGVEHVGGDMFEKVPKGDAVFMKWILHDWSDDHCIKLLKNCYDAIPNDGKVIIVDSILPTLPETTSATKAVAQCDMVEMTLYQGGKERSGDEFKALATKAGFKHVVFQCLVSNLWVIEFLKDFIPHQG 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6302866 6305712 - CaPI482276_10g003950.1 Cam10g0395 137058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0395 375 Gene3D Vaccinia Virus protein VP39 120 368 IPR029063 -
Cam10g0395 375 PANTHER O-METHYLTRANSFERASE 23 351 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cam10g0395 375 Gene3D - 3 119 IPR036388 -
Cam10g0395 375 FunFam Caffeic acid O-methyltransferase 120 368 - -
Cam10g0395 375 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983(InterPro)
Cam10g0395 375 SUPERFAMILY Winged helix DNA-binding domain 20 122 IPR036390 -
Cam10g0395 375 FunFam Caffeic acid 3-O-methyltransferase 3 119 - -
Cam10g0395 375 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171(InterPro)
Cam10g0395 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 366 IPR029063 -
Cam10g0395 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 368 IPR016461 GO:0008168(InterPro)
Cam10g0395 375 PIRSF O-mtase 4 368 IPR016461 GO:0008168(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0395 Cam-Chr10:6302866 Cam10g1371 Cam-Chr10:27286887 1.00E-33 dispersed
Cam10g0395 Cam-Chr10:6302866 Cam10g0396 Cam-Chr10:6319707 2.40E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0395 K13066 - csv:101214675 625.55