Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0417 ATGACCCCAAAAAATCTCCTTGTTTTTTCCCTTTTCCTGTTTCTCTTCACTCCTCCAAGAACTGAGTGTATTGGCTTCGATTTCAGTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACCTCCGCGATGGCGTTATCGGCCTCACCAAAGAGCTCGGAGTTCCTTCCTCGAGCGCCGGCGCCGTAATTTACAACAATCCAATCGGATTCTACGACGCCGATGCCAACATCACTGCCTCCTTCTCTACAAGATTCTCTTTCTCCATCACCAACATTAACCCCACTTCCTCCGGCGATGGCCTTTCCTTTTTCCTCTCCCCCGATAACCAAACCCTCGGCAGCCCCGGTGGGTATTTGGGTCTCGTCAATTCTTCCCAATTGACCAAGAACAAGTTTCTGGCGGTTGAATTTGATACACGGCTTGATTCTGTCTTCAACGATCCTAATGCCCACCATGTTGGCTTCGACATTGAGAGCTTGATTTCGATCAAGACGGCTAACCCTGCTTCTCAAGGTGTAAATCTCAAGAGTGGGAAGTCGATTACGGCTTGGATTGAGTACAAGAATGAGGAAAATAGGCTGAGGGTCTTCTTGAGTAATTCTGGTTTGAAACCTTCCAAGGCGCTTCTCGACGTCGGTGTCGATCTTTCGAACTATCTTAAGGAGGTTATGTATGTCGGGTTTTCCGGTTCGACTGAAGGGAGTACTGAGCTTCATTTGATTGAGAGTTGGAGTTTTAATACTTCTGGGTTTGTACCTGCTAGGCCTAGATTTAACCCTCATAATGTTTCTGATAGCTCTGTGATTGTCTCACCTAATATTTCTATATCTGATTCTGGTAATGCTCATCACAATAGACTCGGGTTGGGTCTCGGGATCGCCGGGCCGGCTTTCTTTTGTGCCGTGATTGTTGTGTTTGGTTTCTTTTCACTTGAGAAATGGAGAAAGATTAGGGCTCAGAAAAGCATAAAGGCAGAGCTTTTGACAGGTCCTAGAGAGTTTAGTTATAGAGAACTAAAGACGGCCACAAAAGGATTTCATTCCAGTAGGATCGTTGGCAATGGGGCTTTTGGGACAGTCTATAAAGCTTTTTTCATCTCATCCGGAACCATTTCTGCGGTTAAAAGATCGAAGCATTCTCACGAAGGGAAGACCGAGTTCCTAGCCGAGTTGTCGATCATAGCTCGGTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGCGTTGAGAAAGGTGAATTGCTTCTCGTTTATGACTTCATGCCGAACGGGAGCCTTGATAGGCTGCTTTACCAAGAATCTGGAGAAGCTAGCTTGTTAAACTGGTCTCACAGATACAATGTTGCTGTTGGATTGGCATCTGTGCTGACATATCTACATCAGGAATGTGAGCAGCAAGTCATCCACAGAGATATAAAGACGGGTAACGTACTGCTGGACGGGAACTTCAATGCAAGATTGGGCGATTTTGGATTGGCGAAGCTCATGGATCATGACAAGAGCCCGGTTTCGACTCTAACTGCAGGAACAATGGGATACCTTGCACCTGAGTATCTTCAATATGGGAAAGCGACTGAGAAAACTGACGTCTTCAGCTATGGAGTGGTTATCCTTGAAGTGACGTGTGGGAGGAGGCCGATTGAAAGAGAACCAGGTACTCAAAAGATGGTCAATCTGGTAGATTGGGTTTGGGGATTGCATTCTCAAGGCAAGATCATTGAAGCAGCTGATAAAAGGTTGAACGGAGAGTTCAGGGAAGAAGAAATGAGGAAGCTCTTACTTGTCGGACTGAGCTGTGCAAACCCGGATAGCTCGGCAAGACCTTCGATGAGGAAGGTCCTACAGATTCTCAACAATGAGGCAGAGCCAGTGTTCGTGCCAAAAATGAAGCCTAGTCTTACATTTTCTTGTGGCTTTTCACTGACTGTGGATGACATTATAATAGAGGAAGAAGGTGGAGGAAAGTGGGAATCTTCAAAGACATCCATTGTCCAAATAGACTGA 2016 46.03 MTPKNLLVFSLFLFLFTPPRTECIGFDFSSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNNPIGFYDADANITASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFLAVEFDTRLDSVFNDPNAHHVGFDIESLISIKTANPASQGVNLKSGKSITAWIEYKNEENRLRVFLSNSGLKPSKALLDVGVDLSNYLKEVMYVGFSGSTEGSTELHLIESWSFNTSGFVPARPRFNPHNVSDSSVIVSPNISISDSGNAHHNRLGLGLGIAGPAFFCAVIVVFGFFSLEKWRKIRAQKSIKAELLTGPREFSYRELKTATKGFHSSRIVGNGAFGTVYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQESGEASLLNWSHRYNVAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVTCGRRPIEREPGTQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFREEEMRKLLLVGLSCANPDSSARPSMRKVLQILNNEAEPVFVPKMKPSLTFSCGFSLTVDDIIIEEEGGGKWESSKTSIVQID 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6522283 6524298 - CaPI482276_10g004170.1 Cam10g0417 137080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0417 671 PANTHER - 38 631 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cam10g0417 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g0417 671 Gene3D - 22 258 - -
Cam10g0417 671 SUPERFAMILY Protein kinase-like (PK-like) 332 642 IPR011009 -
Cam10g0417 671 FunFam L-type lectin-domain containing receptor kinase VIII.1 425 639 - -
Cam10g0417 671 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246(InterPro)
Cam10g0417 671 FunFam L-type lectin-domain containing receptor kinase VIII.1 313 424 - -
Cam10g0417 671 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Cam10g0417 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Cam10g0417 671 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Cam10g0417 671 FunFam L-type lectin-domain containing receptor kinase VIII.1 22 262 - -
Cam10g0417 671 Pfam Legume lectin domain 25 256 IPR001220 GO:0030246(InterPro)
Cam10g0417 671 Gene3D Phosphorylase Kinase; domain 1 313 424 - -
Cam10g0417 671 SMART serkin_6 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0417 671 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Cam10g0417 671 Pfam Protein kinase domain 349 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0417 671 CDD STKc_IRAK 355 623 - -
Cam10g0417 671 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1105 Cam-Chr8:17425639 Cam10g0417 Cam-Chr10:6522283 1.30E-128 dispersed
Cam10g0417 Cam-Chr10:6522283 Cam10g0803 Cam-Chr10:15921734 1.10E-120 dispersed
Cam10g0417 Cam-Chr10:6522283 Cam10g2007 Cam-Chr10:33952059 3.30E-173 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85476 PF00069 Pkinase 5.50E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0417 - - - 0.0