Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0430 ATGCAGGAACCTTCAAGAAAGAAAGTTCCAAATCAATCTCATAGGTTCTATGAACAGCCACAGCAAGAACCTGGTTCCTGTTACTGGCCTCCTATCAACCATGGAGGTGTCTTGTATCCTGACGATGTATACGAACAAAATCACTTACCATCTGAGACTTTCAAACATTCTTGCAACCTTGAGTCGTCCTCGGGAACTAGTAGTTACCCTCCTCAAAATTCTTCCTCTACTGCTAGCTTCACATCAAATGGAAGCCCTTCTTCACACCAAGAGTGCCATTCATACCCGTTAGACCCCTATTATTCTCCCGACAATAATTGTGGCTCACCTGTAAGTAGATCTTGCTTAACAGATGCCGCTGCTGATGACTTAAGGCACAAGATCAGGGAATTGGAGACTGCAATGCTTGGACCTGATGCAGATAGGCTTGACATCTATTCTGTCACGGAACCAGTTAATCCTGTATTACCTGTGCAAGAAATGGGGTGGAATGACGTGGCTGAGATAATCTCTAGAAGGGATTTGAAAGAGGTGCTTTGTGCTTGTGCTCGAGCAATAGAAGAAAACGATATGATGACTGGAGAATGGTTGGTGTCAGAGTTACGTGGAATGGTCTCGGTTTCTGGTGAGCCGATTAAGCGTTTAGGGGCTTACTTGTTAGAGGCACTTGTTGCAAGGACAGCATCTTCAGGTAGTTCTATCTACAAAGCCCTAAGATGTAAAGAGCCTATAGGTGCTGAATTGCTCTCATATATGCATGTTCTCTACGACATTTGCCCTTATTTCAAGTTTGGGTACCTTTCAGCAAATGGGGCAATTGCTGAAGCCATAAAAGGTGAAAATAGAGTTCACATAATTGATTTTCAGATAGCTCAGGGAAATCAGTGGATCACATTGATGCAAGCTCTGGCCAATCGGCCTGGAGGGCCCCCAAAGGTTACTATTACAGGCATAGACGATTCAACTTCAGCTTTTGCTCGAGGAGGGGGGCTTGAGATTGTAGGAAAAAGGTTGACGATTTTGGCAGAGTCATTAAATGTGCCCTTTGAATTCCATGGCATTGCAGGCTCTGCTTCTGAAATTCAACGTGAAGATCTTAAAGTTCAACCAGGTGAAGCGATTGCTGTGAGTTTTGCCTTGGTGCTGCACCATATGCCAGATGAAAGTGTTGGTAGTCAGAATCACCGGGATCGAATTTTGCGGCTGGTCAAGAGTTTGTCTCCAAAAGTCGTGACGGTGGTCGAGCACGAGTCAAACAACAATACAGCTCCCTTTTTTCCCCGTTTCCTCCAGACATTGAAGTATTATACTGCTGTTTTCGAGTCCATAGATGTGACCCTCCCGAGAGATCACAAAGAGCGGATCAACGTGGAGCAGCACTGTTTAGCCCGGGACATCGTAAATTTAGTAGCATGTGAGGGACCCGAAAGAGTCGAACGCCATGAACTTTTCGGAAAGTGGAGATCACGGCTACTCATGGCTGGGTTTAAGCCACATCCTTTAAGCCCTTTTGTGAATGCTACTATTGAGGCACTGCTAAAGAACTACTGTGACAAGTACACACTTGAAGAAAGGGATGGAGTTCTATATCTTGGTTGGTTGAATCAAAATTTGGTTACCTCTAGTGCTTGGATTTGA 1638 44.75 MQEPSRKKVPNQSHRFYEQPQQEPGSCYWPPINHGGVLYPDDVYEQNHLPSETFKHSCNLESSSGTSSYPPQNSSSTASFTSNGSPSSHQECHSYPLDPYYSPDNNCGSPVSRSCLTDAAADDLRHKIRELETAMLGPDADRLDIYSVTEPVNPVLPVQEMGWNDVAEIISRRDLKEVLCACARAIEENDMMTGEWLVSELRGMVSVSGEPIKRLGAYLLEALVARTASSGSSIYKALRCKEPIGAELLSYMHVLYDICPYFKFGYLSANGAIAEAIKGENRVHIIDFQIAQGNQWITLMQALANRPGGPPKVTITGIDDSTSAFARGGGLEIVGKRLTILAESLNVPFEFHGIAGSASEIQREDLKVQPGEAIAVSFALVLHHMPDESVGSQNHRDRILRLVKSLSPKVVTVVEHESNNNTAPFFPRFLQTLKYYTAVFESIDVTLPRDHKERINVEQHCLARDIVNLVACEGPERVERHELFGKWRSRLLMAGFKPHPLSPFVNATIEALLKNYCDKYTLEERDGVLYLGWLNQNLVTSSAWI 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6656386 6658023 + CaPI482276_10g004300.1 Cam10g0430 137093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0430 545 MobiDBLite consensus disorder prediction 1 31 - -
Cam10g0430 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 544 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cam10g0430 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Cam10g0430 545 Pfam GRAS domain family 175 544 IPR005202 -
Cam10g0430 545 MobiDBLite consensus disorder prediction 55 91 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1990 Cam-Chr1:33163736 Cam10g0430 Cam-Chr10:6656386 7.30E-46 dispersed
Cam02g0884 Cam-Chr2:12088796 Cam10g0430 Cam-Chr10:6656386 2.10E-169 dispersed
Cam03g0134 Cam-Chr3:2246993 Cam10g0430 Cam-Chr10:6656386 1.70E-56 dispersed
Cam09g0506 Cam-Chr9:5189927 Cam10g0430 Cam-Chr10:6656386 3.40E-25 dispersed
Cam09g0961 Cam-Chr9:9939946 Cam10g0430 Cam-Chr10:6656386 1.60E-112 dispersed
Cam10g0430 Cam-Chr10:6656386 Cam11g0755 Cam-Chr11:9384547 1.50E-70 dispersed
Cam10g0430 Cam-Chr10:6656386 Cam10g2080 Cam-Chr10:34543467 2.00E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52706 PF03514 GRAS 1.30E-129 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0430 K27748 - csv:101220072 1007.28