Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0432 ATGATGCCTAGTATGATGACAGAGTCATCAGAGAAGGAGACAGAGGCATTTGTAGAGGTGGATCCGACGGGTCGATATGGGCGGTACGGGGAGCTTCTGGGGACAGGGGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAAGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAACTAAGGAGTTTTTCAAATGATCCATCCATGATAGATAGGTTGTATTCAGAGGTGAGATTGTTAAGAACCTTAAAGAACAACAACATAATTGCCTTGTATGATGTTTGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACTGAGGTTTGTACAAGTGGAAACCTTAGAGAGTACAGGAAGAAGCATAGGCAAGTCTCTTTGAAAGCTTTGAAGAAATGGTCCAAACAAATTCTTAAGGGTTTGCATTATTTGCATTCTCATGACCCTTGTGTTATTCATAGAGATCTCAACTGTAGCAACCTCTTTGTCAATGGCAATGTTGGCCAGGTAAAGATTGGTGACTTGGGTTTAGCAGCAACCGTGAGAAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCTGAGCTATATGAAGAGCATTACACCGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTTGAATTAGTCACTTTAGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTATAAAAAAGTCTCTTCAGGCATCAAGCCTCAAGCCTTTGACAAGGTCAAGGACCCTGAAGTCAAGGCTTTCATCGAGAATTGCCTTGCCGAATCTCGAGCTCGGCCCTCAGCTGCTGACCTCCTCCGCCACCCCTTCTTCGGAGAAATTGATGATGACGAAAACGACGACGACAATGATCATTAA 900 42.78 MMPSMMTESSEKETEAFVEVDPTGRYGRYGELLGTGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVRLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHSHDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQAFDKVKDPEVKAFIENCLAESRARPSAADLLRHPFFGEIDDDENDDDNDH 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6692502 6694815 + CaPI482276_10g004320.1 Cam10g0432 137095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0432 299 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Cam10g0432 299 PIRSF TyrPK_CSF1-R 26 132 - -
Cam10g0432 299 PIRSF TyrPK_CSF1-R 120 282 - -
Cam10g0432 299 SUPERFAMILY Protein kinase-like (PK-like) 29 290 IPR011009 -
Cam10g0432 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0432 299 CDD STKc_WNK 25 285 - -
Cam10g0432 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0432 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 286 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cam10g0432 299 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Cam10g0432 299 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Cam10g0432 299 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0998 Cam-Chr6:15480120 Cam10g0432 Cam-Chr10:6692502 8.90E-101 dispersed
Cam09g1076 Cam-Chr9:11121031 Cam10g0432 Cam-Chr10:6692502 3.00E-11 dispersed
Cam10g0432 Cam-Chr10:6692502 Cam05g1951 Cam-Chr5:28405675 1.40E-22 dispersed
Cam10g0432 Cam-Chr10:6692502 Cam02g1702 Cam-Chr2:30052736 9.80E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85477 PF00069 Pkinase 6.60E-52 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0432 K08867 - csv:101221172 553.518