Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0438 ATGGCTCTACAGAGTTTTGGTTCGTTAATCAAAGAGCCTCGTTTTGTAGTTAGAAAGTTTCTTGCTAGACCTCAACATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCATTCCTTGTTCTCGATGAGTTTTCTGTTACTGCACCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAAACTGTCACTTACATGTTAGGGGGAGCAATGACACATGAAGATTTCAAAGGGCATAAAGGAAGAATTGGAGCTGGTGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGATTGAGCCAAGGTATCAAGAAATACACAACAAGGACGTAGTAGAAGTTACAAGAGAAGGAGTAAAAGTGAGAGTGATAGCAGGGGAAGCCTTGGGAGCAAAATCCCCAATCTACACCAAAACTCCAACCATGTACTTGGACTTCACTCTCGGCCCGGGATCTCGCATCAAGCAGCCGATCCCGGTGGGGTGGAATGCGTTCGTGTACGTACTAGAAGGTGAGGGCGGAGTGTTCGGGAGCATGAAATCGATGCCGATTACGCCACATCACCTTCTTTTGTTGGGGAATGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTAAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGCGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATAGAGGATTTTGAGAATTGTACAAATGGATTTGAGAGAGCAAGGCATTGGAGTTCACAACCTTAA 894 45.97 MALQSFGSLIKEPRFVVRKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLGGAMTHEDFKGHKGRIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEIHNKDVVEVTREGVKVRVIAGEALGAKSPIYTKTPTMYLDFTLGPGSRIKQPIPVGWNAFVYVLEGEGGVFGSMKSMPITPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWSSQP 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6754886 6757490 - CaPI482276_10g004380.1 Cam10g0438 137101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0438 297 FunFam pirin 27 164 - -
Cam10g0438 297 Pfam Pirin C-terminal cupin domain 179 286 IPR008778 -
Cam10g0438 297 CDD cupin_pirin_C 176 254 - -
Cam10g0438 297 PIRSF Pirin 12 294 IPR012093 -
Cam10g0438 297 SUPERFAMILY RmlC-like cupins 14 295 IPR011051 -
Cam10g0438 297 Gene3D Jelly Rolls 148 255 IPR014710 -
Cam10g0438 297 Gene3D Jelly Rolls 27 281 IPR014710 -
Cam10g0438 297 PANTHER PIRIN-RELATED 11 296 IPR012093 -
Cam10g0438 297 CDD cupin_pirin_N 31 128 - -
Cam10g0438 297 Pfam Pirin 33 126 IPR003829 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g2131 Cam-Chr9:35876908 Cam10g0438 Cam-Chr10:6754886 9.80E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0438 K06911 - csv:101204082 531.561