Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g0438 | ATGGCTCTACAGAGTTTTGGTTCGTTAATCAAAGAGCCTCGTTTTGTAGTTAGAAAGTTTCTTGCTAGACCTCAACATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCATTCCTTGTTCTCGATGAGTTTTCTGTTACTGCACCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAAACTGTCACTTACATGTTAGGGGGAGCAATGACACATGAAGATTTCAAAGGGCATAAAGGAAGAATTGGAGCTGGTGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGATTGAGCCAAGGTATCAAGAAATACACAACAAGGACGTAGTAGAAGTTACAAGAGAAGGAGTAAAAGTGAGAGTGATAGCAGGGGAAGCCTTGGGAGCAAAATCCCCAATCTACACCAAAACTCCAACCATGTACTTGGACTTCACTCTCGGCCCGGGATCTCGCATCAAGCAGCCGATCCCGGTGGGGTGGAATGCGTTCGTGTACGTACTAGAAGGTGAGGGCGGAGTGTTCGGGAGCATGAAATCGATGCCGATTACGCCACATCACCTTCTTTTGTTGGGGAATGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTAAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGCGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATAGAGGATTTTGAGAATTGTACAAATGGATTTGAGAGAGCAAGGCATTGGAGTTCACAACCTTAA | 894 | 45.97 | MALQSFGSLIKEPRFVVRKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLGGAMTHEDFKGHKGRIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEIHNKDVVEVTREGVKVRVIAGEALGAKSPIYTKTPTMYLDFTLGPGSRIKQPIPVGWNAFVYVLEGEGGVFGSMKSMPITPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWSSQP | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6754886 | 6757490 | - | CaPI482276_10g004380.1 | Cam10g0438 | 137101 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g0438 | 297 | FunFam | pirin | 27 | 164 | - | - | |
Cam10g0438 | 297 | Pfam | Pirin C-terminal cupin domain | 179 | 286 | IPR008778 | - | |
Cam10g0438 | 297 | CDD | cupin_pirin_C | 176 | 254 | - | - | |
Cam10g0438 | 297 | PIRSF | Pirin | 12 | 294 | IPR012093 | - | |
Cam10g0438 | 297 | SUPERFAMILY | RmlC-like cupins | 14 | 295 | IPR011051 | - | |
Cam10g0438 | 297 | Gene3D | Jelly Rolls | 148 | 255 | IPR014710 | - | |
Cam10g0438 | 297 | Gene3D | Jelly Rolls | 27 | 281 | IPR014710 | - | |
Cam10g0438 | 297 | PANTHER | PIRIN-RELATED | 11 | 296 | IPR012093 | - | |
Cam10g0438 | 297 | CDD | cupin_pirin_N | 31 | 128 | - | - | |
Cam10g0438 | 297 | Pfam | Pirin | 33 | 126 | IPR003829 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam09g2131 | Cam-Chr9:35876908 | Cam10g0438 | Cam-Chr10:6754886 | 9.80E-133 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g0438 | K06911 | - | csv:101204082 | 531.561 |