Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0497 ATGATGAATAAGGATTCCCTTTTCCACATCGAGAATATCCTTCTCATTCTTCTCAAGCTTTCTATACTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTGCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA 471 44.59 MMNKDSLFHIENILLILLKLSILAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7439529 7441393 - CaPI482276_10g004970.1 Cam10g0497 137160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0497 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 45 156 - GO:0003723(PANTHER)
Cam10g0497 156 FunFam Eukaryotic translation initiation factor SUI1 46 156 - -
Cam10g0497 156 Gene3D - 35 156 - -
Cam10g0497 156 NCBIfam translation initiation factor SUI1 49 156 IPR005874 GO:0003743(InterPro)
Cam10g0497 156 SUPERFAMILY eIF1-like 43 156 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam10g0497 156 CDD eIF1_SUI1 72 155 IPR005874 GO:0003743(InterPro)
Cam10g0497 156 ProSiteProfiles Translation initiation factor SUI1 family profile. 74 144 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam10g0497 156 Pfam Translation initiation factor SUI1 71 145 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0192 Cam-Chr2:2841989 Cam10g0497 Cam-Chr10:7439529 1.20E-45 dispersed
Cam09g1068 Cam-Chr9:11028201 Cam10g0497 Cam-Chr10:7439529 5.50E-47 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0497 K03113 - csv:101214921 228.794