Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0512 ATGGATGAACTTAAAATGTCTTCGATTTCCTACGAATCCGATCGGCCGGTAGTTTCTGACCCAAAATGCGAAGTCGTTATTAAATCTGATGGGAATCTGAATGAGAACAAGAATGTGAATTTCTTAAGATTCATGGAGGAACTTGATGCTCAAATTGCTTGGTTTCAGCATAGGCGGTTTGGTGTTGCGCAACTGCCACCAGAAATTGGGAAGCTCTGGACAGAGACGCGTGAGAAACGCCTAATTTGGCTCAACAAGCTTTCTGAAAATGGCGGAAATAGCCACTCACACCATCCTTCTCAAATTAGCAAATTTGACTCAGTCTCTCTCGATTCCAAACTTGGAGGGTTTCCTACTGCAACAAAGAAGAAAAACAAGCTTCATGAGGAGAAAGTCAATAGGAAGTCTTTGAAAAAGAGCATTAAAGAGTATCATGACACAAAAACTTTAGCCTCATTTGCCAACATTTCCTTTAAATCTGATAGCAGTCGGCGAAGGTACATAACTGAGGAGATAAAAAAGTTAGGAAAAGGAAACATCTCTGCTCAAATTTTTACATTTTGTGAGCTATCTACGGCTACAAATAACTTCAACCACGAAAATCTGTTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGGCGTCATTGAAAGCACACAACAAATAACGGCCGTGAAGCAACTTGACCGAAATGGATTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCTAATCTTGTGAATTTGGTTGGGTATTGTGCTGATGGGGATCAGAGAATTTTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTTGATATAGCATCAGATAAGCCACCTCTGGACTGGAAGACAAGGATGAAAATTGCCGAAGGAGCGGCAAAAGGACTTGAATACTTGCACGAAACTGCTAATCCTCCCGTGATATACCGTGATTTCAAAGCTTCAAACATATTGTTGGACGAGGAATTCAATCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGACAAATCTCATGTTTCCACTAGGGTGATGGGAACCTATGGTTACTGTGCTCCTGAATATGCACTTACAGGACAATTGACGACGAAATCAGATGTCTATAGTTTTGGTGTCGTGTTTCTGGAGATTATAACTGGAAGAAGGGTTATAGACAATGCAAGACCAACAGCAGAACAAAATTTAATTACTTGGGCACAACCACTTTTCAAAGACAGAAGAAAATTTACCCTAATGGCAGATCCAAAGCTAGAAGGAAATTATCCAGTGAAGGCTCTGTATCAAGCTTTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCGGGTACTCGACCATTGATCAGCGACGTGGTTACGGCCCTTGAATATTTAGCTGCAAACAAGGATGTCGATGCAGACGTAGATGATGAATCAGATTCAGGATCGGTATTGGGATCGGGATCAGGTTCAGCTTCTCCTGATAGAAGTAGTAACAATGGAGATAAAAATGTTGATGTTGAGGGTGATGGGAGGTGA 1566 41.7 MDELKMSSISYESDRPVVSDPKCEVVIKSDGNLNENKNVNFLRFMEELDAQIAWFQHRRFGVAQLPPEIGKLWTETREKRLIWLNKLSENGGNSHSHHPSQISKFDSVSLDSKLGGFPTATKKKNKLHEEKVNRKSLKKSIKEYHDTKTLASFANISFKSDSSRRRYITEEIKKLGKGNISAQIFTFCELSTATNNFNHENLLGEGGFGRVYKGVIESTQQITAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDKPPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVAAMCLQEEAGTRPLISDVVTALEYLAANKDVDADVDDESDSGSVLGSGSGSASPDRSSNNGDKNVDVEGDGR 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7600385 7606489 + CaPI482276_10g005120.1 Cam10g0512 137175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0512 521 ProSiteProfiles Protein kinase domain profile. 197 474 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0512 521 CDD STKc_IRAK 203 472 - -
Cam10g0512 521 PANTHER OS07G0668900 PROTEIN 141 481 - -
Cam10g0512 521 MobiDBLite consensus disorder prediction 491 509 - -
Cam10g0512 521 FunFam Serine/threonine-protein kinase CDL1-like 168 273 - -
Cam10g0512 521 Pfam Protein kinase domain 198 467 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0512 521 Gene3D Transferase(Phosphotransferase) domain 1 274 493 - -
Cam10g0512 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g0512 521 SUPERFAMILY Protein kinase-like (PK-like) 181 469 IPR011009 -
Cam10g0512 521 ProSitePatterns Protein kinases ATP-binding region signature. 203 226 IPR017441 GO:0005524(InterPro)
Cam10g0512 521 Gene3D Phosphorylase Kinase; domain 1 156 273 - -
Cam10g0512 521 MobiDBLite consensus disorder prediction 482 521 - -
Cam10g0512 521 FunFam Serine/threonine-protein kinase PBS1 274 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1057 Cam-Chr9:10932702 Cam10g0512 Cam-Chr10:7600385 1.10E-174 dispersed
Cam10g0512 Cam-Chr10:7600385 Cam10g2032 Cam-Chr10:34163794 2.90E-132 dispersed
Cam10g0512 Cam-Chr10:7600385 Cam05g0685 Cam-Chr5:5961838 1.20E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85479 PF00069 Pkinase 1.20E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0512 - - - 0.0