Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0516 ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTAATGGGTCCGACGTGGTTCTCCGGCGGAGTGGTCCGGCGTTAATCCGGCGGTTTTCATGTCCACCTCCATTGCCGGCGCAAAAACCTCAAGGCTCCGTTGTGTGTATGAAAAATGCTCTCCATATCTCCTCGGTTTCCAATTTTGGGCCGCTGGGAACTCGGAAGAGTGATTTGATCACGTGCAAGGCCTACGAGGCTAACCGATCGCAGCCGATTGAGTCGAACATTGAAATAACGGTGGCCGAAACGCCGTCCGAGGCGGCGAAGAAGGTGAAGATCGGACTGTATTTTGCTCTCTGGTGGAGTTTGAACGTCGTGTTCAACATTTACAACAAGAAAGTTTTGAACGCGTATCCATATCCATGGCTAACCTCCACACTTTCTCTTGCTGTTGGTTCTCTCATCATGTTAGTCTCTTGGATGACGAGGATCGCCGAGGCTCCCAAGACCGATTTCGAGTTCTGGAAATCCCTGTTCCCTGTTGCTGTGGCCCATACAATTGGCCATGTAGCGGCAACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGGGAGCCTGCATTCAGCGTATTGGTTTCGAGGTTCCTGTTGGGTGAGACTTTTCCTGTTCCAGTCTACCTCTCTCTTCTCCCGATCATTGGTGGCTGTGCGCTTGCTGCCGTGACCGAGCTCAACTTCAATATGATAGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGTCTGTTAGTGGAATGAACTACTACGCCTGTTTGTCTATATTGTCCCTTTTGATTCTTACCCCATTCGCAATTGCTGTCGAAGGACCGCAGATGTGGGCTGCAGGATGGAAAACAGCTCTCTCTGAGATTGGACCTAATTTTGTTTGGTGGTTAGCAGCACAGAGTGTCTTCTATCATCTCTACAACCAAGTATCCTACATGTCGCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGCAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATAATCATCTTCCGCACGCCTATACAACCCGTCAACACTCTCGGAGCTGCAATTGCCGTTCTTGGAACCTTCTTATATTCACAGGCTTCTGATCAAGAATTCCTCAAACATATTCTTTATGAATATGAGTTGGCTTTGGGTCAGAGTGTGAATTTTTCCAAATCTGTCATGGTTTTTTCTCTTAATGCTGTTCCTACTTATGCCATGAGTTGCTTCCAGCTTCCAAAGCGCTTTTGTAATGAAACTATAAAGATTTGTGCTAGATTTTGGTGGGGGTTCTACTTTGGACTATTCAGTGTTAGAGCTGACTTGTTCTCCGTCAAGTTCTTATTTATGGAAAAGTTTGTGCTAGGGTCGAGAAATGCTCTTAAAAGGGGCAGTGTTGAATTTCAGAGTTTATTTATCCATTGGCACTACCAGCCACCGCTTACCTCAGTCGACGCTGTTGCCGTCGTTTCGCCATCCATAACCGCCGGGAGCTGCCGGCCTGACGTTTTCGCCGTCGTCCGCCGTGGGTAG 1614 46.96 MISSFTQSAKPINGSDVVLRRSGPALIRRFSCPPPLPAQKPQGSVVCMKNALHISSVSNFGPLGTRKSDLITCKAYEANRSQPIESNIEITVAETPSEAAKKVKIGLYFALWWSLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTALSEIGPNFVWWLAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPIQPVNTLGAAIAVLGTFLYSQASDQEFLKHILYEYELALGQSVNFSKSVMVFSLNAVPTYAMSCFQLPKRFCNETIKICARFWWGFYFGLFSVRADLFSVKFLFMEKFVLGSRNALKRGSVEFQSLFIHWHYQPPLTSVDAVAVVSPSITAGSCRPDVFAVVRRG 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7641485 7652589 - CaPI482276_10g005160.1 Cam10g0516 137179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0516 537 PANTHER SOLUTE CARRIER FAMILY 35 99 394 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cam10g0516 537 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cam10g0516 537 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 397 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam10g0516 537 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Cam10g0516 537 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2267 Cam-Chr1:34988228 Cam10g0516 Cam-Chr10:7641485 3.10E-155 dispersed
Cam05g0285 Cam-Chr5:2740126 Cam10g0516 Cam-Chr10:7641485 2.80E-85 dispersed
Cam09g1964 Cam-Chr9:34307235 Cam10g0516 Cam-Chr10:7641485 8.00E-58 dispersed
Cam01g2388 Cam-Chr1:35829773 Cam10g0516 Cam-Chr10:7641485 1.90E-60 transposed
Cam05g2562 Cam-Chr5:33385121 Cam10g0516 Cam-Chr10:7641485 9.80E-62 transposed
Cam10g0516 Cam-Chr10:7641485 Cam05g1627 Cam-Chr5:23270059 3.40E-184 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0516 K15283 - csv:101216838 729.554