Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0582 ATGCCAACAGTTTGGTTATCATTGAAGAAATCTTTGCACTGTAAGTCAGAGCCATCAGAAGTTCATGACCCAAAAAGTAGGAAGAATTTAGGAGCTATTTTGACAAGAAAAACAGGGGGCGGAGGAGGAGGAAGATCAGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGCGGCAGCAAAAGGCATTTGGATAAGCCTCCAAGTTGCAGTCCAAGATCCATTGGCAGCAGTGAGTTTCTTAACCCAATAACCCACGAAGTCATTCTCAGCAACTCAAGATGTGAGCTCAAAATCACCGGTTTTCATGGTGGTTTCCCCCAAGATCTTCCTGCCGCCGATCCTCACGGCGGCGCTAACGGCGCTTCCACCTTTGTTGGTACTCTCACACCGGGCACGCCCGGCCCCGGTGGCCACCCTTCAATGCATTACTTCAATCCTTCCTTGAGGTCTTCGAAAAAACTCCCTTTCAGAGAGGGATTTGGTAGCTCTAATAAATCTGGCGGCGGAGGAGCCCGCAGCGGAGTACATTCGAGCAATAGAATCTCTTTGGAAACAGAGAATAGTAGGAATGGAACTTCTGCTGCGGTTACTTGCCATAAATGTGGAGAGCAGTTCAATAAATGGGATGCTGCTGAAGCACATCATCTTTCTAAACATGCTGTGACTGAGCTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATTTGCAGGACAAGCTGGTTAAAGTCAGAGAATCAAAGTGGCAGAATAGAAAGAGTCCTAAAAGTTCACAATATGCAACGCACGCTAGCTCGATTCGAGGAGTATCGCGAGACGGTTAAGATCAAAGCGAGCAAGCTTCCAAAGAAGCACCCTCGGTGCCTTGCAGACGGGAACGAGCTCCTGCGATTCTACGGGACGACAGTGGCATGTTCGCTGGGTGTTAACGGCTCCTCCAGCCTATGCATATCAGAGAAATGCTGCGTTTGTAGGATCATACGTAACGGGTTCTCGGCAAAGACAGAGATGAAAGAAGGGATAGGCGTATTCACAACTTCGACGAGTGCGAGAGCATTCAACTCGATCGAGGCAGCAGGAGGGGACGAGACGATGAGGAGGAAAGCGATGATAGTTTGTAGGGTGATTGCAGGGAGAGTTCATAGGCCATTGGAGAACATACAAGAAATGGCTGGGCAGACAGGGTTTGATTCATTGGCAGGGAAAGTTGGGTTGCATTCAAATATAGAAGAGCTTTATTTGCTGAATCCTAGAGCTTTGCTTCCATGTTTTGTGGTAATTTGCAAACCATGA 1308 47.48 MPTVWLSLKKSLHCKSEPSEVHDPKSRKNLGAILTRKTGGGGGGRSGCSRSIANLKDVIHGGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFHGGFPQDLPAADPHGGANGASTFVGTLTPGTPGPGGHPSMHYFNPSLRSSKKLPFREGFGSSNKSGGGGARSGVHSSNRISLETENSRNGTSAAVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQSGRIERVLKVHNMQRTLARFEEYRETVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGVNGSSSLCISEKCCVCRIIRNGFSAKTEMKEGIGVFTTSTSARAFNSIEAAGGDETMRRKAMIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8972982 8974602 - CaPI482276_10g005820.1 Cam10g0582 137245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0582 435 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 434 - -
Cam10g0582 435 Gene3D - 225 434 - -
Cam10g0582 435 SUPERFAMILY ADP-ribosylation 225 434 - -
Cam10g0582 435 ProSitePatterns Zinc finger C2H2 type domain signature. 202 223 IPR013087 -
Cam10g0582 435 MobiDBLite consensus disorder prediction 160 193 - -
Cam10g0582 435 MobiDBLite consensus disorder prediction 170 193 - -
Cam10g0582 435 FunFam C2H2-like zinc finger protein 224 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1655 Cam-Chr5:24411273 Cam10g0582 Cam-Chr10:8972982 5.70E-166 dispersed
Cam05g2005 Cam-Chr5:28810964 Cam10g0582 Cam-Chr10:8972982 3.70E-53 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52712 None None None None Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0582 - - - 0.0