Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0600 ATGGCCACCGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTCCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCGATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTAAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA 798 55.51 MATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9201747 9203438 + CaPI482276_10g006000.1 Cam10g0600 137263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0600 265 Pfam Chlorophyll A-B binding protein 64 232 IPR022796 -
Cam10g0600 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 264 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cam10g0600 265 Gene3D Chlorophyll a/b binding protein domain 54 258 - -
Cam10g0600 265 SUPERFAMILY Chlorophyll a-b binding protein 46 262 - -
Cam10g0600 265 FunFam Chlorophyll a-b binding protein, chloroplastic 54 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0600 Cam-Chr10:9201747 Cam10g1500 Cam-Chr10:28771723 6.50E-96 dispersed
Cam10g0600 Cam-Chr10:9201747 Cam01g2494 Cam-Chr1:36640626 1.00E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0600 K08914 - csv:101207278 521.161