Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0714 ATGGCGACCAACAAGGAGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTTTTGGAATCTGGCTACACAACAATACATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCTAACCTTAGGGTTTTCGAAGTGAATGTGATGGACGGCGAGGCGGTGGCCAGGGCTGTCGAAGGCTGCAAGGGCGTATTCCACATTGCCTCACCCTGCACATTGGAGGATCCGATTGATCCGCAGAAAGAATTGGTGGAGCCGGCGGTGCAAGGCACTATCAATGTTCTTAATGCGGCGAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCTGCTCTTGTCCCTAACCCCGGTTGGCCGTCTGGTATGCCTTTCGATGAATCCTCATGGACGGACATAGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGTAGAGAATCATGGACTGGATGTTGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTCCAACCTAATTTGAACGCAAGTTGTGCTGTATTGCTGCAGTTGCTCCAGGGATCCCAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATTTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGATTTTGCGGACAAAGTCTCAAAAATATGCCCTCAATTTCCAGTTCACAGATTTGTGGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAATTTGCCATTCAAGATACCCTTGAGAGTCTTAGAAGCAAAGGCTTTTTGGATCAGTGA 984 47.36 MATNKEKEPVCVTGANGFIGSWVVRTLLESGYTTIHTSIFPGSDSSHLFNLQASTNPNANLRVFEVNVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVQGTINVLNAAKKFGVRRVVLTSSISALVPNPGWPSGMPFDESSWTDIEYCKSRKKWYPVSKTLAEKSAWEFVENHGLDVVSILPATCLGPLLQPNLNASCAVLLQLLQGSQDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFSDFADKVSKICPQFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEFAIQDTLESLRSKGFLDQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11731215 11734056 + CaPI482276_10g007140.1 Cam10g0714 137377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0714 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Cam10g0714 327 CDD FR_SDR_e 10 303 - -
Cam10g0714 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
Cam10g0714 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Cam10g0714 327 Gene3D - 1 327 - -
Cam10g0714 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 316 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0032 Cam-Chr3:1288112 Cam10g0714 Cam-Chr10:11731215 1.20E-91 dispersed
Cam10g0714 Cam-Chr10:11731215 Cam10g1379 Cam-Chr10:27362776 1.50E-62 dispersed
Cam10g0714 Cam-Chr10:11731215 Cam09g0326 Cam-Chr9:3619736 4.70E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0714 - - - 0.0