Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0734 ATGTCCATCACATTTCACCGAACCGATCGGTTCAGCCAGTTTAATATTAATATCGAACCGAACCCCAATTGGGCCAAGCGAAAGCTAGTCGCCATGGGAGCCCATCCAGCATTGTTGGGCCAAGCAGGCATCTCTGACTCTAACTCATTGATATCGCCCTCTCATTTTTCTTCGCCTCTGCTGCAACTTGCTAAGGACCTCTACTTCTCCATCGGATCTCTGAGCTTCGACAGGATAATTCTGGCAATTCTTCGGAGTAAAGAACTCGTAACTGAAATGGCTGGGGGAGGAATGATTCGGCAGTTGCTGAGGAAATTTCCATCTCAATCTTCAACCCCTCCATTGACCTCATCCCTTATTTCAAAGAATCAGGAAGCTGGCTTTGCTGGGATGAACTCCTTTAGAAGGCTGGCTCTTCTTGGAGCAGGCATTTCAGGGTTTTTCAGTTTTGCAACTTTGGCATCTGCTGATGAGGCAGAACATGGTTTGGAGTGTCCAAGCTACCCGTGGCCTCACCAGGGCATTTTGAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAGGTTTACCAACAAGTTTGTGCATCTTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCTATGGCTGCTGAAATTGAGGTAGTTGATGGACCCAATGATGAGGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTCAACCATATGCAAATGAACAAGCTGCTAGATTTGCTAATGGTGGAGCATACCCTCCAGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGAGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAGTACGAAGATGGTACCCCTGCCACAGAAGCACAGATGGGGAAAGATGTTGTATCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTTGTGCTCTCTCTGGCTCTACTTCAGGCTGCATATTACCGGCGATTGAAGTGGTCGGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTAGTGAATTAG 1200 46.33 MSITFHRTDRFSQFNINIEPNPNWAKRKLVAMGAHPALLGQAGISDSNSLISPSHFSSPLLQLAKDLYFSIGSLSFDRIILAILRSKELVTEMAGGGMIRQLLRKFPSQSSTPPLTSSLISKNQEAGFAGMNSFRRLALLGAGISGFFSFATLASADEAEHGLECPSYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12563174 12568265 + CaPI482276_10g007340.1 Cam10g0734 137397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0734 399 FunFam Cytochrome c1, heme protein 159 354 - -
Cam10g0734 399 ProSiteProfiles Cytochrome c family profile. 182 289 IPR009056 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 FunFam Cytochrome c1, heme protein, mitochondrial 355 399 - -
Cam10g0734 399 PANTHER CYTOCHROME C1 118 397 IPR002326 GO:0005750(PANTHER)|GO:0006122(PANTHER)|GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 354 398 IPR021157 -
Cam10g0734 399 Pfam Cytochrome C1 family 170 386 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 354 369 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 233 253 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 266 290 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 315 334 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 304 315 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 168 187 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 188 207 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 PRINTS Cytochrome C1 signature 335 354 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 SUPERFAMILY Cytochrome c 163 353 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Cam10g0734 399 Gene3D - 355 398 - -
Cam10g0734 399 Gene3D - 159 354 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0734 K00413 - csv:101215010 605.905