Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0787 ATGCCATTTCTGAACCTTCCTCCGTCTTCTCCCCACCTTCTTTTCTTCATCATTTACTTCTTCTTCTTTCACTTCTCTGTTTTCGCTCTCTTCTCCAACCACGATTACGATATTCTGATACGAATTAAAAACACCCATCTCGATGATCCCAAAGGCTGTTTGAACAATTGGGTTCCCAACCAAGCTCACAACCCCTGTAATTGGACTGGAATCACCTGCGATTCCACTAATTCCTCTGTTCTTTCCATCGATCTCAGTGATTCCGGCGTCTCCGGCGGATTTCCCTTCGAGTTTTGCCGGATTTCGTCTCTGAAATCCCTTTCTATCTCCAACTGCAGCGTCAATGGAACTTTACTCTCTCCTTCCTTCTCTCTCTGTTCTCACTTGCAACTCCTTAATCTTTCCTCTAACTTACTCGTCGGGAACCTGCCGGAGTTTTCCGCTGGTTTCACACAACTGAAAATTCTCGATCTCTCCGCCAACAATTTCACCGGTGATATTCCTCAAAGCTTCGGACAGTTACCGGCGCTGAGAGTGCTCCGTTTGTCGCAGAATCTGCTCAACGGCTCATTACCTTCTTTTCTGGGAAAACTCAGTGAGCTAACTGAAATGGCCATCGCTTATAATAATTTCAAACCCAATCGGTTACCACCTGAAATCGGAAACCTGAAGAAACTTGTAAACCTGTTTTTACCGTTTTCGAATTTCGTTGGACCCATTCCTGATTCCATCGGCAACCTTACTTTGCTTACTAATCTCGATTTATCTAGCAATTCCATTTCGGGTCCGATCCCGGATTCAATCGGCGGACTAAGGAGCATAAAGAAGATTCAACTCTATAACAATCGAATCTCCGGTGAGTTGCCGGAGATCATCGGAAATTTGACTACTCTGTTTTCGCTGGACATCTCGCAGAATAGTCTCACCGGGAAACTGCCGGAGAAAATTGCTGCTCTCCCTCTTCAATATCTGCATCTCAGTGACAATTTCCTCGACGGCGAGGTCCCGGAGAGCTTAGCTTCTAACCCAAATCTTCTCAATTTGAAATTGTTTAACAATAGCTTTTACGGCGAACTTCCCCGGAATTTGGGTCTGAATACTTATTTGAATGAGATTGATGTCTCTACCAACAATTTTGTGGGTGAAATTCCGAAATTTCTCTGCCATGGAAACCAACTTCAGAAAATCGTTTTATTCAACAACCGTCTCTCTGGAAATTTCCCAGAATCGTACGGTAGTTGCGATTCTCTGTATTATGTCAGAATTGAGAACAATCAACTTTCCGGGAAGGTACCGGACTCGTTCTGGAATCTCTCTAAGCTTACTAATATTCTGCTGGCGGAAAATCGATTTCAGGGCTCCATTCCTCCGGCGATAAGTGGCGTTCGTTTTCTCGAAGATTTGTTGATTTCCGGTAACAACTTCTCCGGCCAGTTACCGAAGGAGATTTGCAAATTGCGAGAGCTCGTCCGGTTAGACGTCAGCAGGAATAAATTCTCCGGCGGAGTTCCTTCCTGTATAACAGAGTTGCAGCATCTTCAAAAGCTCGACATGGAAGAAAACATGTTCACCGGAGAAATACCCAAATCGGTTTACACATGGAAAGAACTAACCGAGTTGAATCTGTCGCACAATCAATTCATCGGCGAGATTCCGCCTCAACTCGGCGATTTACCAGTTCTAAAGTACTTGGATCTCTCTGCAAATTCACTCTCCGGCGAAATCCCCGAGGAATTGACGAAGCTTAAACTGGGTCAGTTCAATTTCTCCAACAACAAATTAACCGGAAAAGTTCCTTCCGGCTTCGACAACGAACTATTTGTCAGTAGCTTAATGGGTAATCCGGGTCTGTGTAGCCCGGATTTGAAGCCGCTGAACCGGTGCCCCAAACCCAAATCCATAAGTTTTTATGTTGTCATTGTTTTGTCGCTTATTGCTTTCATTCTCATCGGCTCTCTCATCTGGGTAATCAAATTCAAGATGAATCTCTTCAAGAAATCGAAATCCCCGTGGACGGTGACCAAGTTCCAACGTGTCGGGTTCGATGAAGAAGATGTAATTCCTCATCTAACCAAAGCAAATGTTATAGGGTCAGGCGGGTCAGGTACTGTCTTCAAGGTTGATCTAAAAATGGGTCAGACCATCGCAGTGAAGAACCTATGGGGTGGCCACAATAAATTGGATACAGAATTGGTTTTCCAGTCTGAAGTTGAGACATTGGGTCGGATCCGGCATGCCAATATTGTGAAGTTGCTCTTAAGTTGTAGCAATGGCGAAGGAAGTAGGATTCTTGTGTACGAGTACATGGAAAATGGTAGTTTGGGAGATGTCCTACACGAACACAAATCCGAAGCTTTGTCTGATTGGTCAAAACGATACAACATCGCCCTCGGAGCAGCCCAAGGATTAGCTTACTTGCACCATGACTGCGTCCCTCCGATAATCCATCGCGATGTGAAGAGTAACAACATTCTCTTGGATGGAGAATTTCAACCTCGGGTGGCTGACTTCGGTTTGGCAAAGTCAATGCAACGACAGGCAGAAGCAAATGATGGCAATGTCATGTCTCGCATTGCTGGCTCCTACGGTTACATTGCCCCTGAGTATGGATATACAATGAAGGTGACAGAGAAGAGCGATGTGTATAGCTTTGGAGTGGTGTTGATGGAGCTAGTGACAGGGAAGCGACCGAACGATGCGTGTTTTAGGGAGAATGAAGATATTGTGAAATGGGTGACAAAGGCTGCTTTGTCTGAGGGAAAAGAAGAGAAAGGGTTGAGTTTGGATGAGATCATTGATGAAAAGTTGGATCCAAGGACATGTGAAGTAGAAGAGATTGTCAAGATTTTGGATGTGGCAGTGCTTTGTACTTCTGCTTTGCCTCTCAACAGACCATCCATGAGGAGAGTGGTTGAGCTCATAAGGGACACCAAATTGCCTCATTCCAAGTCATGA 2955 44.87 MPFLNLPPSSPHLLFFIIYFFFFHFSVFALFSNHDYDILIRIKNTHLDDPKGCLNNWVPNQAHNPCNWTGITCDSTNSSVLSIDLSDSGVSGGFPFEFCRISSLKSLSISNCSVNGTLLSPSFSLCSHLQLLNLSSNLLVGNLPEFSAGFTQLKILDLSANNFTGDIPQSFGQLPALRVLRLSQNLLNGSLPSFLGKLSELTEMAIAYNNFKPNRLPPEIGNLKKLVNLFLPFSNFVGPIPDSIGNLTLLTNLDLSSNSISGPIPDSIGGLRSIKKIQLYNNRISGELPEIIGNLTTLFSLDISQNSLTGKLPEKIAALPLQYLHLSDNFLDGEVPESLASNPNLLNLKLFNNSFYGELPRNLGLNTYLNEIDVSTNNFVGEIPKFLCHGNQLQKIVLFNNRLSGNFPESYGSCDSLYYVRIENNQLSGKVPDSFWNLSKLTNILLAENRFQGSIPPAISGVRFLEDLLISGNNFSGQLPKEICKLRELVRLDVSRNKFSGGVPSCITELQHLQKLDMEENMFTGEIPKSVYTWKELTELNLSHNQFIGEIPPQLGDLPVLKYLDLSANSLSGEIPEELTKLKLGQFNFSNNKLTGKVPSGFDNELFVSSLMGNPGLCSPDLKPLNRCPKPKSISFYVVIVLSLIAFILIGSLIWVIKFKMNLFKKSKSPWTVTKFQRVGFDEEDVIPHLTKANVIGSGGSGTVFKVDLKMGQTIAVKNLWGGHNKLDTELVFQSEVETLGRIRHANIVKLLLSCSNGEGSRILVYEYMENGSLGDVLHEHKSEALSDWSKRYNIALGAAQGLAYLHHDCVPPIIHRDVKSNNILLDGEFQPRVADFGLAKSMQRQAEANDGNVMSRIAGSYGYIAPEYGYTMKVTEKSDVYSFGVVLMELVTGKRPNDACFRENEDIVKWVTKAALSEGKEEKGLSLDEIIDEKLDPRTCEVEEIVKILDVAVLCTSALPLNRPSMRRVVELIRDTKLPHSKS 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14888227 14891264 - CaPI482276_10g007870.1 Cam10g0787 137450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0787 984 SUPERFAMILY L domain-like 370 624 - -
Cam10g0787 984 FunFam Leucine-rich repeat receptor-like protein kinase 32 193 - -
Cam10g0787 984 Gene3D Ribonuclease Inhibitor 215 319 IPR032675 -
Cam10g0787 984 Pfam Protein kinase domain 692 900 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0787 984 Gene3D Ribonuclease Inhibitor 320 635 IPR032675 -
Cam10g0787 984 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524(InterPro)
Cam10g0787 984 SUPERFAMILY Protein kinase-like (PK-like) 683 973 IPR011009 -
Cam10g0787 984 ProSiteProfiles Protein kinase domain profile. 690 979 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0787 984 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 ProSiteProfiles Leucine-rich repeat profile. 536 559 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 769 984 - -
Cam10g0787 984 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Cam10g0787 984 SMART serkin_6 690 974 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g0787 984 FunFam Leucine-rich receptor-like protein kinase family protein 216 314 - -
Cam10g0787 984 SMART LRR_typ_2 486 510 IPR003591 -
Cam10g0787 984 SMART LRR_typ_2 174 198 IPR003591 -
Cam10g0787 984 SMART LRR_typ_2 150 173 IPR003591 -
Cam10g0787 984 SMART LRR_typ_2 247 271 IPR003591 -
Cam10g0787 984 SMART LRR_typ_2 558 582 IPR003591 -
Cam10g0787 984 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 974 IPR050647 -
Cam10g0787 984 Gene3D Transferase(Phosphotransferase) domain 1 769 983 - -
Cam10g0787 984 Gene3D Phosphorylase Kinase; domain 1 665 768 - -
Cam10g0787 984 SUPERFAMILY RNI-like 78 388 - -
Cam10g0787 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g0787 984 FunFam Receptor-like protein kinase HSL1 320 625 - -
Cam10g0787 984 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Cam10g0787 984 Pfam Leucine Rich Repeat 537 558 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 Pfam Leucine Rich Repeat 416 438 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 Pfam Leucine Rich Repeat 321 341 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 Pfam Leucine Rich Repeat 274 295 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 Pfam Leucine Rich Repeat 561 582 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 Pfam Leucine Rich Repeat 250 271 IPR001611 GO:0005515(InterPro)
Cam10g0787 984 Pfam Leucine Rich Repeat 465 486 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0250 Cam-Chr2:3377187 Cam10g0787 Cam-Chr10:14888227 7.70E-94 dispersed
Cam09g1652 Cam-Chr9:28328399 Cam10g0787 Cam-Chr10:14888227 1.50E-54 dispersed
Cam10g0787 Cam-Chr10:14888227 Cam11g1509 Cam-Chr11:27951395 2.60E-73 dispersed
Cam10g0787 Cam-Chr10:14888227 Cam10g0790 Cam-Chr10:15046422 8.00E-75 proximal
Cam01g1418 Cam-Chr1:27725449 Cam10g0787 Cam-Chr10:14888227 2.60E-06 transposed
Cam08g1666 Cam-Chr8:22904380 Cam10g0787 Cam-Chr10:14888227 1.90E-84 transposed
Cam10g0787 Cam-Chr10:14888227 Cam07g0702 Cam-Chr7:14836671 3.20E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85485 PF00069 Pkinase 1.30E-42 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0787 - - - 0.0