Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g0871 | ATGGATCCAGAGACGCAAAATGATCAGTCAATGCAAGAATACCATTTAATCTCTGATGGGAAGGTAATATTGGAGGGGAAATCTAACTTCGCAAAAAAGCAGCCTTTATTGGATGCTATTACTACTGAATCTCTGAGGATGGGTGATAGTTTTAATCAATGGATGAGTAGAGAACTAGGAGATGTGAAGGAGGCAAGCATGCAGTCCAATTCTGGAACATACTGGAATAGTGTAGAAAATGACGTTGGACAGCTCTTTCGCATTATTGATTTTTCACCAAGCTGGGCATATGAAGGTTCTGAAATCAAGGTTTTGGTATCAGGGAAGTTCTTGAAGAGTCCACATGAAGTGGAAAATCTTAAATGGTGTTGCATGTTTGGAGAGGTGGAAGTACCAGCTGAAGTTATAGCAGATGGTGTATTGCGATGTTTTACTCCCATACACAAGGCTGGGAAGGTTCCCTTTTATGTTACACGTTCCAATAGATTAGCTTGTAGTGAAGTACGAGACTTTGAATACCGAGTTAAGTGCATACAAGATGTGGATGTAATGTACGATCATAGCATCAAAAATCAAGCACTTGTTTTGCGTTTTGTAAAATTAATATGCCTGAGCTGTTCAGACACTTTGATTGCTGATCCAAACAGCTCAAGTGACAGATCTGACTATAATAAAATCCGTGAATTGCTAGAGGTTGACAATAGTGAGTGGGATCAGTTGATAAAGCCTAGATGGGATGAGAGTGTTTCCCTTGAAAGCGCAAAAGAATTGCTGCTTCAAAGGCTACTTAAAGAGAAGCTACACGTATGGCTATTGCAAAAAGTCAGGGAAGGTGGGAGAGGCCCTAGCGTATTGGATGAGCAAGGTCAAGGCGTGATACATTTTGCTGCTGCACTTAACTATGATTGGGCCCTTCTACCAGCATTAGTTGCTGGTATAAATGTCAATTTTCGTGATGCAAATGGATGGACAGCACTACATTGGGCTGCATTCTTTGGCAGAGAGCGTACAGTCGCTGCCCTCATCTCTCTGGGTGCAGCTCCTGGAGCACTGGCAGATCCAAGCCTCAAGTATCCATCTGGCAGAACTCCTGCTGATTTAGCATCCTCAAATGGGCACAAAGGAATTGCTGGTTATCTTGCAGAGTCGGTGCTAAGCGCACACTTGGAATCTCTGAATTTTGATAATCAAGAAAGTAAGGCTGCAGATACTTGTGGAGAAAAAGCAGTACAAACAGCTGCTGAGCGTGTCCCCACTCCGCACGAGGGCAATGATATGTATACATTGTCCCTCAAGGACTCATTAGCAGCCGTATCTAATGCTACCCAAGCTGCTGCTCGTATTCACGAGGTTATGAGGGTGCAGTCCTTCCAAAGAAAGCAATTGGAGGTGAACGATAAATTCGACGTTTCAAATGATCAGGCTTTTTCACTTTTACCAGTTAAGAGACGTAATCCGGGATCACATGATGATGAGCATGCTGCTGCCATTCGCATACAAAACAAGTTCCGTAGTTGGAAGGGCAGAAAAGATTTTCTAATAGTCCGACAGAGAATTGTTAAAATTCAGGCCCATGCAAGAGGCCATCAGGTGCGAAACAACTATCGGAAAATTTTGTGGTCAGTGGGAATTTTGGAGAAGGTTATTTTGCGTTGGAGAAGAAAAGGAAGTGGTTTACGAGGATTTAGGCCAGAAGCAACTGCTGAGGACTGCAGTAGGCAAAATACATCGTTGACAGAGGATGATGACGACTTTTTAAAACAAGGCAGAAAGCAAATAGAAGAAAGGTTGCAGAAGGCTCTTGCTAGAGTTAAGTCTATGGTGCAATATCCTGAGGCAAGGGATCAATATCGCAGGCTGTTAAATGTTGTCATGGAGATGCAAGATATAAAGGTGAAAGATGGTGTTCTAGACAATGCAGATGAAACAGATGACTTTGATGACCTAATTGACATTAAAGCCCTATTGGATGAAGATGCTTTCACTCCTACTGCATCGGTGTAA | 2004 | 42.66 | MDPETQNDQSMQEYHLISDGKVILEGKSNFAKKQPLLDAITTESLRMGDSFNQWMSRELGDVKEASMQSNSGTYWNSVENDVGQLFRIIDFSPSWAYEGSEIKVLVSGKFLKSPHEVENLKWCCMFGEVEVPAEVIADGVLRCFTPIHKAGKVPFYVTRSNRLACSEVRDFEYRVKCIQDVDVMYDHSIKNQALVLRFVKLICLSCSDTLIADPNSSSDRSDYNKIRELLEVDNSEWDQLIKPRWDESVSLESAKELLLQRLLKEKLHVWLLQKVREGGRGPSVLDEQGQGVIHFAAALNYDWALLPALVAGINVNFRDANGWTALHWAAFFGRERTVAALISLGAAPGALADPSLKYPSGRTPADLASSNGHKGIAGYLAESVLSAHLESLNFDNQESKAADTCGEKAVQTAAERVPTPHEGNDMYTLSLKDSLAAVSNATQAAARIHEVMRVQSFQRKQLEVNDKFDVSNDQAFSLLPVKRRNPGSHDDEHAAAIRIQNKFRSWKGRKDFLIVRQRIVKIQAHARGHQVRNNYRKILWSVGILEKVILRWRRKGSGLRGFRPEATAEDCSRQNTSLTEDDDDFLKQGRKQIEERLQKALARVKSMVQYPEARDQYRRLLNVVMEMQDIKVKDGVLDNADETDDFDDLIDIKALLDEDAFTPTASV | 667 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 19560520 | 19564297 | - | CaPI482276_10g008710.1 | Cam10g0871 | 137534 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g0871 | 667 | Gene3D | - | 490 | 539 | - | - | |
Cam10g0871 | 667 | SUPERFAMILY | Ankyrin repeat | 274 | 382 | IPR036770 | - | |
Cam10g0871 | 667 | ProSiteProfiles | IQ motif profile. | 516 | 539 | - | - | |
Cam10g0871 | 667 | ProSiteProfiles | IQ motif profile. | 492 | 521 | - | - | |
Cam10g0871 | 667 | SMART | ANK_2a | 321 | 350 | IPR002110 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | SMART | ANK_2a | 360 | 389 | IPR002110 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 27 | 626 | - | GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Cam10g0871 | 667 | Pfam | IQ calmodulin-binding motif | 517 | 536 | IPR000048 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | Pfam | IQ calmodulin-binding motif | 493 | 512 | IPR000048 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | SUPERFAMILY | E set domains | 88 | 174 | IPR014756 | - | |
Cam10g0871 | 667 | Gene3D | - | 212 | 384 | IPR036770 | - | |
Cam10g0871 | 667 | Gene3D | Immunoglobulins | 81 | 177 | IPR013783 | - | |
Cam10g0871 | 667 | SMART | iq_5 | 491 | 513 | IPR000048 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | SMART | iq_5 | 514 | 536 | IPR000048 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | ProSiteProfiles | Ankyrin repeat region circular profile. | 321 | 346 | - | - | |
Cam10g0871 | 667 | Pfam | Ankyrin repeats (3 copies) | 294 | 383 | IPR002110 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | ProSiteProfiles | Ankyrin repeat profile. | 321 | 353 | IPR002110 | GO:0005515(InterPro) | |
Cam10g0871 | 667 | FunFam | Calmodulin-binding transcription activator 2 | 491 | 539 | - | - | |
Cam10g0871 | 667 | FunFam | Calmodulin-binding transcription activator 2 | 81 | 177 | - | - | |
Cam10g0871 | 667 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 492 | 542 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0007 | Cam-Chr6:1867352 | Cam10g0871 | Cam-Chr10:19560520 | 5.30E-107 | dispersed | |
Cam06g0464 | Cam-Chr6:6760119 | Cam10g0871 | Cam-Chr10:19560520 | 2.90E-79 | dispersed | |
Cam09g1648 | Cam-Chr9:28137002 | Cam10g0871 | Cam-Chr10:19560520 | 9.70E-146 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g0871 | K21596 | - | vvi:100247418 | 784.252 |