Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0872 ATGAAACGATTTGCTAACAAGCAATCAACCTTATTTGATCATCAGAATCAGATCAATGGCATTGAAAATCAGTTGCTGTTAAGATGTGGAGAGATTAAGCGTTGGGAATCCGATCAATGCACCAACTATTCTCAATTTTCCTTCAAACCAGTCGTCGGCAATGCTTTGACTTTATTCTACTCAAATTCAGCGTCTTCTTCCATGATTAATTTCGCAATTGAGCTGCAATTGTCTCTCCTGCGAGTTTTGGAATGTCCGAAATTCGCTCATCTCCGATATACACTAGATATTGAACGAATCCTTTTAGAAGCAAAACATCGATGGCTACGCCCGGCTGAAATATGTGAAATTCTCAAAAACTACGATAAATTTTCTATTGCTTCAGAGCCTGCTAATATGCCTCCAAGTGGTTCACTTTTTCTTTATGATCGAAAGGTGGTAAGATACTTCCGCAAGGATGGACATAATTGGAGGAAGAAGAAAGGAAAGGCGGTAAAGGAAGCTCACGAGAGGCTCAAGGCTGGAAGTGTGTATGTGCTGAATTGCTACTATGCACATGGGGAAGAAAATGAAAATTTTCAGAGGCGCACTTATTGGATGCTGGAAGAGGATCTATCAAACATTGTTCTTGTCCACTATCGGGAAGTGCAGAGCAGTAGAGGAAATTTCAATCGTAATAGGGGGACTGATGAAGCTGCTCTATTCTCTCGAGAATTTGAAGATACTAAGAACCATCCAGAAATGGGCGCTTCTAACTCCTCTAGTTTTCATCCATCTAATTATAAAATGCTTTCACAAACTGCTGAAATTAGCCTGAACAGTGCCCAGGTATCAGAATATGAAGATGCTGAATCAGAATACGGTAACCGAGAAAGTACTGTTTTCCATTCTTTTCTTGGATTACAACAGCTGAAAATGGAGAGTAATAGTGCTGATCTCTGTGATTCGAAGTATCCTATATCATTATCAGATATTTATCAAGAAGACTTTACAGCCTTTGGTGGGAATGGCTTTCCGACTACATCGGATAGAAGTAAATATAGCAATAGTGTTGGATTCATTTACGAGCCCCACAGAAAACTTTGTTTTTCTTCTGAAAACGTCTTGGAAAGTGGTACTACTGGAATATATTCATCCCATCTGCAGCCATCATTTTTTACATCTCAACCTCAAATTTTAGACGATGTTCCAAAACAAGGTGATGAAATAGTGGGACTGCTCTCCTCTGATAAATGTAAAAGGACAGTGTTTAATAATCATCTACATTCCCAGGAAGATTGTCAGGAATTACTTGTGAAATCATCTGGCCAACGAGCCTCTGATCTACCCAGGTCCATAGCCACTAGCACTTCACATTTATAA 1362 39.43 MKRFANKQSTLFDHQNQINGIENQLLLRCGEIKRWESDQCTNYSQFSFKPVVGNALTLFYSNSASSSMINFAIELQLSLLRVLECPKFAHLRYTLDIERILLEAKHRWLRPAEICEILKNYDKFSIASEPANMPPSGSLFLYDRKVVRYFRKDGHNWRKKKGKAVKEAHERLKAGSVYVLNCYYAHGEENENFQRRTYWMLEEDLSNIVLVHYREVQSSRGNFNRNRGTDEAALFSREFEDTKNHPEMGASNSSSFHPSNYKMLSQTAEISLNSAQVSEYEDAESEYGNRESTVFHSFLGLQQLKMESNSADLCDSKYPISLSDIYQEDFTAFGGNGFPTTSDRSKYSNSVGFIYEPHRKLCFSSENVLESGTTGIYSSHLQPSFFTSQPQILDDVPKQGDEIVGLLSSDKCKRTVFNNHLHSQEDCQELLVKSSGQRASDLPRSIATSTSHL 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19570489 19576428 - CaPI482276_10g008720.1 Cam10g0872 137535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0872 453 ProSiteProfiles CG-1 DNA-binding domain profile. 97 222 IPR005559 GO:0003677(InterPro)
Cam10g0872 453 Pfam CG-1 domain 103 215 IPR005559 GO:0003677(InterPro)
Cam10g0872 453 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 96 404 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Cam10g0872 453 SMART CG_1_2 100 217 IPR005559 GO:0003677(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0872 K21596 - cit:102621892 363.229