Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0901 ATGTTGTATAGTGAATGTTTGCAGCTTACATTTGTGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGACCACGTATTTTTTAATTCTGTTCCCAAAAGTGCCTTTTGGCCAGTTTTTCTCATTGCCAATGTTGCTGCATTGATTGCCAGTCGGGCAATGACTACGGCTACCTTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATTATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCTGTTTGCCTGGTGGTCGTCTGCTCCATATCTAGCATGTATGAGATTGGAAATGCATATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACTGTCTTGGTTACCATTGTTATGCTTCTTATTTGGCAGATTAACATTATCATCGTTATGGTTTTTGCGATGATCTTTCTTGGGATAGAACTAATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTATTCGCAGTAATTATGTTTTTCATTATGTATATTTGGAACTACGGAAGCAAGCTCAAATATGAAACTGAAGTGAAGCAAAAGCTGTCAATGGATTTAATGCGAGAACTAGGGTGCAATCTCGGGACAATCAGAGCTCCTGGCATTGGTTTGCTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATCATATTTGTCTGCATCAAGTACGTACCAGTTCCTGTTGTGCCTCAGAGCGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTTCGAAAAGAAAATCATCAGACGTTTGAGCAGCTCTTAATTGAAAGCCTTGAGAAATTCATCCGCAGAGAAGCACAAGAAAGGTCATTAGAGAGCGATGGAGATGATGATACTGATTCCGACGAGACCCGCTGCTCACGATTTCTTGTGGGTCCCAATGGAAGTGTGTATTCGCTTGGCATTCCTCTCCTTGCTGAATTCAACGAGCCTACTAGACCCATAACTGAAGTCATCAACGTACCAGAAGAGGTGCAGCCAGTGGAATCTCCAGACCCCTCGATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCAGGAGTTGTTTACCTTCTTGGTCATGGAGATATTAGAGCACGAAAGGATTCTTGGTTTATTAAGAAGCTTATGATCAATTACTTCTATGCATTTTTAAGAAAGAACAGCAGGAGGGGTATTGCCAACTTGAGTGTACCCCACACCCACCTGATGCAGTGTGCTGCAACATCCCATCTGATTTCTGTGGCGGATTGGATTCAGAGGAAGCTTTTTCACACTTTCTCCTTGGTGTCTTCCATATTGGTTACTCGAACACCAAAGCACAGACTGGGTTCGTATGTTGTGAATAGAATGGAAGAGAACAGTCTTGACAAGGTTTGA 1596 41.98 MLYSECLQLTFVFLVLPCLFLGYLGQAAYLISNHNGADHVFFNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIIIVMVFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSDETRCSRFLVGPNGSVYSLGIPLLAEFNEPTRPITEVINVPEEVQPVESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQCAATSHLISVADWIQRKLFHTFSLVSSILVTRTPKHRLGSYVVNRMEENSLDKV 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20110996 20113943 - CaPI482276_10g009010.1 Cam10g0901 137564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0901 531 Pfam K+ potassium transporter C-terminal domain 238 477 IPR053952 -
Cam10g0901 531 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 481 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam10g0901 531 Pfam K+ potassium transporter integral membrane domain 7 223 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0901 Cam-Chr10:20110996 Cam11g0036 Cam-Chr11:1954642 2.80E-143 dispersed
Cam10g0901 Cam-Chr10:20110996 Cam10g1237 Cam-Chr10:25788990 7.10E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0901 - - - 0.0