Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0902 ATGGCCGAGGCTGAATTGGAGAGGGGCGACGCCAATTGCGGCCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTTTTTCAGGATGAAGATCAATCGGAGATCGACGACGACGACGAGGATAATGCAACGCGCCATCGTATGGATTTGGAATCTGAGGATGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCTTTCGATGTCGAAGCCCTTGACGTCCCTGGTGCCCATAGAAATGAATACGAGGACTTCAGCGTAGGAAAGAAAATTGCTCTTGCTTTTCAGACCCTTGGAGTCGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGACGAAGATGTGATTGGGGCATTATCGCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCGAATCAACTGCCTTCGGATACCCGAATATCAAGTTTTAGATTAAAGGTGCCATCAGCTGAACTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACCTTGAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCCGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTCTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTTATATGGTTTTGTACACTTGCAGGCATTGGGATTTATAACCTTGTCATATATGATAGCAGTGTACTGAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTATGTGCTACAGACCTTAGTAACTTGGGTCTATCAGCCTCCTACAGGAAATTCATCGTTGTGCTTTCAAGCAATAGCATGACCTTGCTACAAGTGGATCCTAGAACTTCAGGAATCTTTCTATCCCAATTTTCATCTACACGATTCCCAGGCCTGAGGACTTTGCGAGGTGCAGCCCACACTTGGGGCACACGGTAG 1239 44.15 MAEAELERGDANCGLASMDSSESRWVFQDEDQSEIDDDDEDNATRHRMDLESEDEDNVEQKLIRTGPRIDSFDVEALDVPGAHRNEYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATDLSNLGLSASYRKFIVVLSSNSMTLLQVDPRTSGIFLSQFSSTRFPGLRTLRGAAHTWGTR 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20118633 20125429 - CaPI482276_10g009020.1 Cam10g0902 137565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0902 412 Pfam K+ potassium transporter integral membrane domain 98 351 IPR053951 -
Cam10g0902 412 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 79 351 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam10g0902 412 MobiDBLite consensus disorder prediction 1 59 - -
Cam10g0902 412 MobiDBLite consensus disorder prediction 39 59 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0902 Cam-Chr10:20118633 Cam11g0036 Cam-Chr11:1954642 3.60E-93 dispersed
Cam10g0902 Cam-Chr10:20118633 Cam10g1043 Cam-Chr10:22892577 9.50E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0902 - - - 0.0