Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g0905 ATGGATAACTTATGCTGCTTCAATTCTGTCTATTCTCAGTTTGTAGGAGGACGTTCGTCATGTAGCTCTGGAAAGGGCAGGGGCAATTTATGCCCTGCTAGGTATGGCTTTAGCCTAGTAAAAGGCAAAGCAAATCATCCCATGGAGGACTATCATGTTGCTAAATTTATTACCGTGCATGGCCGGGAGCTAGGCCTTTTTGCTATATATGATGGACATTTAGGAGATAGCGTACCTGCCTATCTACAGAAGCATCTATTTCCTAATATACTGAAGGATGAGGAATTCTGGTCGAATCCCGGTAGCTCTATCTTTAAGGCTTACGAGAAGACAGACCAAGCAATACTCTCACACAGTCCTGACTTAGGAAGAGGTGGATCCACCGCTGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGTGCAGTCCTTTCGAAAAAAGGGCAGGAGGTGCAAATGTCTATTGATCACGAGCCAAACACCGAGCGAGGAAGTATTGAGGACAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGCGACAAGAACCTCAAGACACACTTGCGATCTGATCCTGACATAACAAATGCCGATGTTGACTCTGACACTGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTCATGACAAATCAAGAAGCCGTGGATATAGCAAGAAAAACCAAGGATCCCCAGAGAGCAGCAAAGCAATTAGCAGCAGAAGCACTGAAAAGGGAAAGCAAAGACGACATCTCAATCATCGTAGTTCGTTTCAAAGGGTAA 852 44.84 MDNLCCFNSVYSQFVGGRSSCSSGKGRGNLCPARYGFSLVKGKANHPMEDYHVAKFITVHGRELGLFAIYDGHLGDSVPAYLQKHLFPNILKDEEFWSNPGSSIFKAYEKTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKKGQEVQMSIDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDITNADVDSDTELLILASDGLWKVMTNQEAVDIARKTKDPQRAAKQLAAEALKRESKDDISIIVVRFKG 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20267856 20271732 + CaPI482276_10g009050.1 Cam10g0905 137568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g0905 283 FunFam Probable protein phosphatase 2C 39 26 282 - -
Cam10g0905 283 Gene3D - 30 283 IPR036457 -
Cam10g0905 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Cam10g0905 283 PANTHER PROTEIN PHOSPHATASE 34 279 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam10g0905 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Cam10g0905 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Cam10g0905 283 CDD PP2Cc 34 281 IPR001932 -
Cam10g0905 283 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Cam10g0905 283 SMART PP2C_4 30 279 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0248 Cam-Chr7:3602918 Cam10g0905 Cam-Chr10:20267856 2.60E-82 dispersed
Cam10g0905 Cam-Chr10:20267856 Cam11g1437 Cam-Chr11:27092904 2.80E-121 dispersed
Cam10g0905 Cam-Chr10:20267856 Cam11g1818 Cam-Chr11:30703321 9.40E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g0905 K17506 - csv:101214223 548.895