Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g0905 | ATGGATAACTTATGCTGCTTCAATTCTGTCTATTCTCAGTTTGTAGGAGGACGTTCGTCATGTAGCTCTGGAAAGGGCAGGGGCAATTTATGCCCTGCTAGGTATGGCTTTAGCCTAGTAAAAGGCAAAGCAAATCATCCCATGGAGGACTATCATGTTGCTAAATTTATTACCGTGCATGGCCGGGAGCTAGGCCTTTTTGCTATATATGATGGACATTTAGGAGATAGCGTACCTGCCTATCTACAGAAGCATCTATTTCCTAATATACTGAAGGATGAGGAATTCTGGTCGAATCCCGGTAGCTCTATCTTTAAGGCTTACGAGAAGACAGACCAAGCAATACTCTCACACAGTCCTGACTTAGGAAGAGGTGGATCCACCGCTGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGTGCAGTCCTTTCGAAAAAAGGGCAGGAGGTGCAAATGTCTATTGATCACGAGCCAAACACCGAGCGAGGAAGTATTGAGGACAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGCGACAAGAACCTCAAGACACACTTGCGATCTGATCCTGACATAACAAATGCCGATGTTGACTCTGACACTGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTCATGACAAATCAAGAAGCCGTGGATATAGCAAGAAAAACCAAGGATCCCCAGAGAGCAGCAAAGCAATTAGCAGCAGAAGCACTGAAAAGGGAAAGCAAAGACGACATCTCAATCATCGTAGTTCGTTTCAAAGGGTAA | 852 | 44.84 | MDNLCCFNSVYSQFVGGRSSCSSGKGRGNLCPARYGFSLVKGKANHPMEDYHVAKFITVHGRELGLFAIYDGHLGDSVPAYLQKHLFPNILKDEEFWSNPGSSIFKAYEKTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKKGQEVQMSIDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDITNADVDSDTELLILASDGLWKVMTNQEAVDIARKTKDPQRAAKQLAAEALKRESKDDISIIVVRFKG | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 20267856 | 20271732 | + | CaPI482276_10g009050.1 | Cam10g0905 | 137568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g0905 | 283 | FunFam | Probable protein phosphatase 2C 39 | 26 | 282 | - | - | |
Cam10g0905 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - | |
Cam10g0905 | 283 | Pfam | Protein phosphatase 2C | 43 | 274 | IPR001932 | - | |
Cam10g0905 | 283 | PANTHER | PROTEIN PHOSPHATASE | 34 | 279 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cam10g0905 | 283 | SMART | PP2C_SIG_2 | 45 | 281 | IPR001932 | - | |
Cam10g0905 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
Cam10g0905 | 283 | CDD | PP2Cc | 34 | 281 | IPR001932 | - | |
Cam10g0905 | 283 | SUPERFAMILY | PP2C-like | 30 | 282 | IPR036457 | - | |
Cam10g0905 | 283 | SMART | PP2C_4 | 30 | 279 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0248 | Cam-Chr7:3602918 | Cam10g0905 | Cam-Chr10:20267856 | 2.60E-82 | dispersed | |
Cam10g0905 | Cam-Chr10:20267856 | Cam11g1437 | Cam-Chr11:27092904 | 2.80E-121 | dispersed | |
Cam10g0905 | Cam-Chr10:20267856 | Cam11g1818 | Cam-Chr11:30703321 | 9.40E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g0905 | K17506 | - | csv:101214223 | 548.895 |