Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1043 ATGGCTAATCGGAGCTCCGAACAAGTATCCGATGCCATTCCCGACATGTCGTCATCCGACACAATCGTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGTTGCACTGCCCGTGTCGGAGAGGAAACTGTCATGGCAAAAGCTCCGACGATTCGACTCGTTGGATTTAGAGTCACGTAAACTCCATGGTCATGATGATCATCATCATTCCTATGCCAAGGAGAAGAAATGGAGTGTAATCTTACACTTAGCATTCCAAAGCATCGGCATAGTTTACGGCGACATCGGAACGTCGCCGTTGTACGTGTTCTCGAGCACATTTCCGGATGGAATAAAGCAAAACGACGATATTTTAGGGGCGTTGTCGTTGATCGTTTATACCATAACTTTGATTCCTGTAATCAAGTATGTGTTTATTGTTTTGAGAGCAAACGACAATGGAGAAGGGGGAACCTTTGCATTGTACTCATTGATATGTCGATATGCAAAAGTGGGATTGATTCCGAATGAGGAGATTGAGGATCGAGAAGTGTCGAATTATCAATTAAGTTTGCCGAATGAAAGAGAGAAGAGAGCTTCAAGGATTCAATCAAAGCTAGAGAAAAGCCATTTTGCAAAGGTGTTTCTTCTATTTGCAACTATGCTTGGGACTTCCATGGTCATTGGAGATGGTGTTCTCACTCCTTGTATATCAGTGTTATCTGCTGTGGGAGGGATCAAGGAGGCTACCCCTGCAATGACAGAAGGTAAGATTGTCTGGGCATCAGTAGGCATATTGGTGTGCCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATTATCCTCATTTGGTTTGCTTTCAATGCTGGAATTGGTATCTACAACTTCATAAAATATGACCCAACTGTCATTAAAGCCTTAAATCCAAACTACATTTTTCAATACTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTTGGTGGCATTGTTCTTGCCATTACAGGGACCGAAGCCTTGTTCGCCGACGTCGGGCATTTCAGCGTCCGATCGATCCAGCTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATATTTGCTTACATAGGCCAAGCTTCGTTTCTTCGCAAGCATGATGATCTAGTGTCGGACACATTCTACAAGTCAATTCCTGGAAGTTTGTATTGGCCAGTGTTTGTTGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATTTCAGGAACATTCTCAATAATTCAACAATCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACATCAGCTAAGTATGAAGGGCAAGTTTATGTTCCTGAGATAAATTACCTTTTGATGTTGGCTTGTGTTGGTGTTACTTTGGGGTTCAAGAACACTACAAAGATTGGGAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCTTTCTTAGTACTCGTTATGGTTATGATATGGAAAACTCATATCCTTTTCATAATCACTTACATTCTCATCATTGGTAGTGTGGAATTGGTGTATTTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTTCCTTTGGCTTTTGCAGCTGCTTTGATGACAATCATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAATAACAAAATCTCTACAGAAAAGCTCAATGGGATGGTGAATGCCACCAACTTTAGAAGAATTCCAGGCATTGCATTCTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACGTCGACCACATTCCTGCACTGCATTCTGTGCTCGTCTTCATCACCATTAAATCGCTTCCTGTGAGCAAGGTTCCGGCAGATGAACGTTTCCTCTTCCGACAAGTAGAGGCGAAGGAGATCGACGTGTTTCGTTGTGTTGTTCGATACGGGTACACGGATGTGCAGACAGAACAAGAATCGTTTGAGAAGATATTGATTGAAAGATTGGAAGAGTTCGAGAGAGAACGACGTAGATTGGTTAAAGGGGCAAATAAAGTTGAAAATGAGAATGAGGATGAGAAAGGATTTGGAGGAATTGGAGAAGCATGGAAGGATGGAGTTGTTCATTTAGTTGGTGAAAGTGAAGTGGTTGCTAAAAAAGGGGCAAGCTTTGGGCAGAGAATGATGATAAACTATGCATATAGCTTCTTAAAGAGGAATTTGAGGCAAACTGATCAAGTATTTGATATTCCTCGCAAGCATATGCTCAAAGTAGGAATGACTTGTGAACTTTAG 2304 41.58 MANRSSEQVSDAIPDMSSSDTIVKEEEEEEEEVVALPVSERKLSWQKLRRFDSLDLESRKLHGHDDHHHSYAKEKKWSVILHLAFQSIGIVYGDIGTSPLYVFSSTFPDGIKQNDDILGALSLIVYTITLIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNEEIEDREVSNYQLSLPNEREKRASRIQSKLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGKIVWASVGILVCLFMVQRFGTDKVGYTFAPIILIWFAFNAGIGIYNFIKYDPTVIKALNPNYIFQYFQRNKKDAWISLGGIVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALIFAYIGQASFLRKHDDLVSDTFYKSIPGSLYWPVFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLVMVMIWKTHILFIITYILIIGSVELVYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNSVFRKKYFYELNNKISTEKLNGMVNATNFRRIPGIAFFYSELVQGIPPIFKHYVDHIPALHSVLVFITIKSLPVSKVPADERFLFRQVEAKEIDVFRCVVRYGYTDVQTEQESFEKILIERLEEFERERRRLVKGANKVENENEDEKGFGGIGEAWKDGVVHLVGESEVVAKKGASFGQRMMINYAYSFLKRNLRQTDQVFDIPRKHMLKVGMTCEL 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 22892577 22898457 + CaPI482276_10g010430.1 Cam10g1043 137706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1043 767 NCBIfam potassium uptake protein 83 766 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam10g1043 767 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 65 766 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam10g1043 767 MobiDBLite consensus disorder prediction 1 31 - -
Cam10g1043 767 MobiDBLite consensus disorder prediction 1 17 - -
Cam10g1043 767 Pfam K+ potassium transporter C-terminal domain 583 767 IPR053952 -
Cam10g1043 767 Coils Coil 672 692 - -
Cam10g1043 767 Pfam K+ potassium transporter integral membrane domain 83 569 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0607 Cam-Chr9:5978585 Cam10g1043 Cam-Chr10:22892577 8.50E-303 dispersed
Cam10g1043 Cam-Chr10:22892577 Cam10g1237 Cam-Chr10:25788990 7.70E-166 dispersed
Cam07g1353 Cam-Chr7:27886334 Cam10g1043 Cam-Chr10:22892577 3.70E-227 transposed
Cam10g0902 Cam-Chr10:20118633 Cam10g1043 Cam-Chr10:22892577 9.50E-70 transposed
Cam11g0036 Cam-Chr11:1954642 Cam10g1043 Cam-Chr10:22892577 7.90E-191 transposed
Cam10g1043 Cam-Chr10:22892577 Cam09g0606 Cam-Chr9:5960230 2.30E-287 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1043 K03549 - csv:101215797 1280.39