Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1128 ATGTCGGTGCCTGCGGCTTCCGTCACCGCAGGTATATTGGAACAGGTCTCTTACCGGTTTCCAAAACAGTTGATTTTATTGTGGTTTGTGATTTCCGTAACCAATGCCGATGTCCCCGACGTACCACCAGCACCTTTGGTTGCACCTACTACTCGCAATATGCCTCTACCTGCAAAATTGCCTCTTCACCAACACCATCACCGAAAATATATGTCACCACAAAGTGCGCCAGAAGCTGGACTAGCGCCGTCATCTCCTCCTTACTATGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTATTGCAGCAGACTGTTGCAAACCTGACATGGTGTTAAAACGAGGAAGTGGTGATGACTGCCATTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAACGTATCACAGAATCCTAACTGGAAACTCTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGATTAAATATCTCAATGGACATTACTCCCCACGCTGGGATCAGCTTTTCTGCAGTCGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGACCCTACACTGGTTGGCGATTACCATCTTCTCAATATTACCTGGTTTAAGCCTCCACCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCTGTAGCAGCTCCAGCATACCATTTTCCAGCCTCAACATCACTGAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTATTCTTGGTATTGGCGCTGGTTTTTTGTTCGTTGCCATTCTTTTTGTGTTGATAATTTGCTTATGTACATCTCATCGTGGGAAGACTGAAGCACCTCCATTAGTAACTGAAAAACGAAGGGTTGAGGACAAAGTGCCTGTGGCAGGAGCAGGATCTTTCCCTCATCCATCAAGTATGAGATTTCTAACTTATGAAGAGCTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGCATATTGGGGGAGGGCGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGTGACAAGGAATTTTTGGTTGAGGTCGAGATGCTTAGCCGGTTACATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCTGCCCGAGGGCTTGCTTACCTTCACGAGGACTCACAACCTTGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGATACGTCGCCCCTGAGTATGCAATGACGGGCCATCTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTTGAGTTGCTCACCGGAAGGAAACCTGTAGATATGTCACAACCATCGGGACAAGAGAACCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGACCGGTTAGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTCGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTACAGCGCGTTACAGAATACCAAGACTCCATGGTACCATCCTCCAACAACCGAACCAATCTAAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2178 45.96 MSVPAASVTAGILEQVSYRFPKQLILLWFVISVTNADVPDVPPAPLVAPTTRNMPLPAKLPLHQHHHRKYMSPQSAPEAGLAPSSPPYYGHLITSGHPPTSSNFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPIAADCCKPDMVLKRGSGDDCHCVYPIKIDLLLLNVSQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVRLDPTLVGDYHLLNITWFKPPPPSEAPLASASPVAAPAYHFPASTSLSSPSKGHHSNLTLILGIGAGFLFVAILFVLIICLCTSHRGKTEAPPLVTEKRRVEDKVPVAGAGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24350236 24354943 - CaPI482276_10g011280.1 Cam10g1128 137791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1128 725 ProSiteProfiles Protein kinase domain profile. 381 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1128 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 361 458 - -
Cam10g1128 725 SUPERFAMILY Protein kinase-like (PK-like) 360 658 IPR011009 -
Cam10g1128 725 Gene3D Phosphorylase Kinase; domain 1 362 458 - -
Cam10g1128 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 459 676 - -
Cam10g1128 725 Gene3D Transferase(Phosphotransferase) domain 1 459 681 - -
Cam10g1128 725 PANTHER OS01G0750732 PROTEIN 148 698 IPR050885 -
Cam10g1128 725 Pfam Protein tyrosine and serine/threonine kinase 384 656 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g1128 725 CDD STKc_IRAK 387 657 - -
Cam10g1128 725 MobiDBLite consensus disorder prediction 666 707 - -
Cam10g1128 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g1128 725 MobiDBLite consensus disorder prediction 100 121 - -
Cam10g1128 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0268 Cam-Chr7:3768145 Cam10g1128 Cam-Chr10:24350236 3.70E-87 dispersed
Cam08g1820 Cam-Chr8:24290313 Cam10g1128 Cam-Chr10:24350236 2.20E-72 dispersed
Cam09g0060 Cam-Chr9:1502068 Cam10g1128 Cam-Chr10:24350236 7.40E-104 dispersed
Cam09g0458 Cam-Chr9:4830726 Cam10g1128 Cam-Chr10:24350236 1.10E-75 dispersed
Cam10g1128 Cam-Chr10:24350236 Cam10g2032 Cam-Chr10:34163794 4.40E-86 dispersed
Cam10g1730 Cam-Chr10:31337629 Cam10g1128 Cam-Chr10:24350236 1.70E-70 dispersed
Cam10g1128 Cam-Chr10:24350236 Cam03g1572 Cam-Chr3:30707699 7.20E-105 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85491 PF00069 Pkinase 6.10E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1128 - - - 0.0