Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1151 ATGGAGGAAACTTTTGTTCCTCTTCGTGGAATTAAGAATGACCTGAAAGGGAGATTAGTGTGTTACAAACAAGACTGGACTGGTGGTTTGAGAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGGGTGTTGACTGCAGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCCATTGTTGGAGGTCAACCTTTGCTCATCTTGGGTGTTGCGGAGCCCACGGTTATTATGTACACCTTCATGTTTAATTTTGCTAAGGAACGTCCCGAGTTGGGCCGGAATTTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGTGCTTGTTCCATCATCAATAGGTTCACACGTCTGGCTGGTGAACTGTTCGGTTTGCTTATTGCGATGCTTTTCATGCAGCAAGCGATCAAAGGACTTGTGGATGAGTTTCGCATCCCAGAACGGGAAAATCCAAAATTGCTCCAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTATCATTTGGCCTTCTACTCACTGCTTTAAGGAGCCGAAAAGCCCGGTCATGGCGATATGGATCAGGTTCGCTCAGAAGCTTGATAGCAGACTATGGAGTACCGCTCATGGTTCTTGTTTGGACAGGTATTTCTTATATACCTTCAAAAAGTGTCCCACAAGGAATCCCAAGGCGACTCTTCAGCCCCAATCCATGGTCTCCCGGTGCGTATGAAAATTGGACTGTTATTAAGGATATGCTTGACGTTCCAGTTTTCTATATCTGTGGAGCTTTCATCCCCGCTACGATGATTGCGGTGCTTTACTATTTTGACCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAGCCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGTCTTCTTGGAATCCCTCCATCCAATGGAGTCATCCCACAATCTCCAATGCATACAAAGAGCCTGGCTACTCTCAAACACCAGTTGCTGCGGAATAAACTTGTAGAGACAGCACGAAGTAGTATGAGAAAGAATGCTAGCTTAGGACAGTTGTATGGAAGTATGCAACAAGCATATCAACAAATGCAGACCCCCTTGATCTACCAACAGCCTTCAATTCGTGGACTGAATGAGCTAAAAGAGACAACCATTCAAGCAGCTTCTAGTATGGGCAGCTTCGATGCTCCGGTCGACGAGACAATATTTGATATCGAAAAGGAAATTGATGATTTATTGCCTGTTGAGGTGAAAGAACAACGGGTCAGTAATTTGCTTCAAGCTATAATGGTGGGAGGATGCGTTGCAGCCATGCCAGTCCTAAAAAAGATCCCGACCTCAGTTCTATGGGGTTACTTCGCTTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTTACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCATGCGACTTTCGTCGAAACCGTGCCATTCAAATCCATTGTACTTTTTACCATTTTTCAAACAGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATTGCCGGGGTGATGTTTCCTCTGATGATCATGCTCCTCGTCCCTGTAAGACAATACCTTCTTCCCAAGTTTTTCAAAGGGGCACATCTCCAAGACCTTGATGCTGCCGAATACGAAGAAGCACCGGCTTTACCGTTCAATCTTGCAACAGAAGCCGAGCTGGGCGCTGGAGCATCTTTCGGTGGGGATGGAGAGATTTTAGATGAGGTTATCACCCGAAGCCGCGGTGAGTTTAGGCGTATTAGCAGTCCTAAAATCACAAGCTCCACAGCAACACCAATATCTGACCGAAAAAGTATAGACAGCCCTCATCGCTCTTTCAGCCCTCGGTTGAGCGAGCTAAGAGGAGAGCACAGTCCTCGAGCTGGTGGACGAGGGACACCAGGTCAGAGGAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAATAACACAGCATCAAAGTAA 2154 45.22 MEETFVPLRGIKNDLKGRLVCYKQDWTGGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVDEFRIPERENPKLLQFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGSLRSLIADYGVPLMVLVWTGISYIPSKSVPQGIPRRLFSPNPWSPGAYENWTVIKDMLDVPVFYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGSMQQAYQQMQTPLIYQQPSIRGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIVLFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRRISSPKITSSTATPISDRKSIDSPHRSFSPRLSELRGEHSPRAGGRGTPGQRSAEAKPSSLGKSPLNNTASK 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24706208 24709810 + CaPI482276_10g011510.1 Cam10g1151 137814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1151 717 MobiDBLite consensus disorder prediction 648 717 - -
Cam10g1151 717 MobiDBLite consensus disorder prediction 664 686 - -
Cam10g1151 717 MobiDBLite consensus disorder prediction 648 663 - -
Cam10g1151 717 PANTHER ANION EXCHANGE PROTEIN 5 639 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cam10g1151 717 Pfam HCO3- transporter integral membrane domain 8 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cam10g1151 717 Pfam HCO3- transporter integral membrane domain 202 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cam10g1151 717 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cam10g1151 717 Gene3D Helical hairpin bin 18 60 - -
Cam10g1151 717 MobiDBLite consensus disorder prediction 698 717 - -
Cam10g1151 717 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1428 Cam-Chr1:27802120 Cam10g1151 Cam-Chr10:24706208 0.00E+00 dispersed
Cam08g1768 Cam-Chr8:23901246 Cam10g1151 Cam-Chr10:24706208 8.20E-215 dispersed
Cam10g1151 Cam-Chr10:24706208 Cam07g1278 Cam-Chr7:27166308 6.90E-217 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1151 K24194 - csv:101205388 1394.79