Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1221 ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTAAAATCCCACGACTGTCCTAAATCCGATCGGAACAGCCGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGAAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAGCCTACATGTGCGGTGAGGCGGTGCCGGGAGATTCTTACGTTTTCCAATACTTGTGTTTGTAAAACCTGCCGGATGAAGGTGTGCTTGAAACACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAGCGGCGGTGGTAGATAAAGGGCGGTGGAATGAAAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGTGGCGATTGTGGGAAGAGGGAACGGCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA 585 56.58 MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGLKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTCRMKVCLKHRFPAEHGCGRPSSTAAAVVDKGRWNEKFMAALGLRSGGDCGKRERPTAAKGSSPTAPSVKAC 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25587089 25587767 - CaPI482276_10g012210.1 Cam10g1221 137884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1221 194 Gene3D - 81 157 IPR035896 -
Cam10g1221 194 SMART AN1_Zf_4 17 56 IPR000058 GO:0008270(InterPro)
Cam10g1221 194 SMART AN1_Zf_4 104 145 IPR000058 GO:0008270(InterPro)
Cam10g1221 194 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 9 169 - GO:0005737(PANTHER)
Cam10g1221 194 Pfam AN1-like Zinc finger 104 142 IPR000058 GO:0008270(InterPro)
Cam10g1221 194 Pfam AN1-like Zinc finger 17 55 IPR000058 GO:0008270(InterPro)
Cam10g1221 194 SUPERFAMILY AN1-like Zinc finger 96 148 IPR035896 -
Cam10g1221 194 ProSiteProfiles Zinc finger AN1-type profile. 98 148 IPR000058 GO:0008270(InterPro)
Cam10g1221 194 Gene3D - 2 70 IPR035896 -
Cam10g1221 194 MobiDBLite consensus disorder prediction 169 194 - -
Cam10g1221 194 SUPERFAMILY AN1-like Zinc finger 10 58 IPR035896 -
Cam10g1221 194 ProSiteProfiles Zinc finger AN1-type profile. 11 59 IPR000058 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0385 Cam-Chr4:14511504 Cam10g1221 Cam-Chr10:25587089 1.10E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1221 - - - 0.0