Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1233 ATGGAGAGAAGCTTGTTTTACAAAGATGTTGTGCCATTCGCGGCCATGGTTGCGGCGGAGTGCGCCACCGTTGGCTCCAACACCGGCTTCAAAGCCGCCACAGCTAGAGGCATCAGCTACTACGTCTTCACCCTCTACGTTTGTATGGTCGCCGCCGCCGCCCTCGTCCCGTTTGCAGTTATCTTTCATAAGTCACCGGAGCTTCCTCCCAACAGAATTTCCTTTTTCTTCAAAATCGTCTGCCTCTCCGCGCTCGGACTATCGTGCCAATTGCTTGGAAACAAAGGACTTGAGTACAGCTCACCAACTCTTTCATCCGCCATTAGCAACCTAATTCCAGCTTTCACTTTCATTATGGCTGTCTTTTTTAGGATGGAAAAGATAGATTTGAAAAGAAGCAGCAGCATAGTGAAAATTGTGGGGTCAACGGTGTCCATAGCAGGTGCTTTGGTAGTGGTTTTGTACAAAGGCCCAATTGTGATATCAAACCCATATTCTCATGGCCCAAAAGAGTTGGGCCTCCTTTATCAAAATTCCCCTTTGGGCTCTTCACATCCACAGCCCAATTGGATAATGGGTGGCCTTTGCTTTGTTTTTCAATACCTTTGCAACTCCTTTTGGTACATTCTTCAGACCCAAATCATAAAAATTTACCCAGATGAGGTAAGTGTGGTGGCAGTATACTACGTTATCCAGGCAGTTTTAACTGCCCCAATTTGTTTGATAGCAGAAACAGATATGAGTGCTTGGAAGCTAACAAATCCACTCAGTTTTCTTTTGATTTTCAACTCGGGTTTGATGGGGCAGTCTTTTGTGGCTGCCATTCACACATGGGGACTTAACTTGAAGGGACCTGTTTATGTGTCTAGTTTTAGGCCATTGTCCATTGCCATTGCAGCTGCTATGGGTGCCCTTCTCCTTGGTGATGATCTTCATCTTGGAAGTATAATTGGAGCAATCATAATATCAATTGGATTCTATGGCATATTGTGGGGAAAAGCAAAAGAAGAAGAATTGAAGGAATTAGATGGTGTTTGTGGGTTGGAATCTTCATCCAAAGCTCCATTGCTGCAATATTATAGAGTTGAAGATGCATAA 1098 44.35 MERSLFYKDVVPFAAMVAAECATVGSNTGFKAATARGISYYVFTLYVCMVAAAALVPFAVIFHKSPELPPNRISFFFKIVCLSALGLSCQLLGNKGLEYSSPTLSSAISNLIPAFTFIMAVFFRMEKIDLKRSSSIVKIVGSTVSIAGALVVVLYKGPIVISNPYSHGPKELGLLYQNSPLGSSHPQPNWIMGGLCFVFQYLCNSFWYILQTQIIKIYPDEVSVVAVYYVIQAVLTAPICLIAETDMSAWKLTNPLSFLLIFNSGLMGQSFVAAIHTWGLNLKGPVYVSSFRPLSIAIAAAMGALLLGDDLHLGSIIGAIIISIGFYGILWGKAKEEELKELDGVCGLESSSKAPLLQYYRVEDA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25737891 25745098 - CaPI482276_10g012330.1 Cam10g1233 137896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1233 365 Pfam EamA-like transporter family 23 146 IPR000620 GO:0016020(InterPro)
Cam10g1233 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Cam10g1233 365 PANTHER WAT1-RELATED PROTEIN 14 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam10g1233 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1930 Cam-Chr9:33995225 Cam10g1233 Cam-Chr10:25737891 1.90E-47 dispersed
Cam10g1233 Cam-Chr10:25737891 Cam11g1347 Cam-Chr11:26181227 8.70E-43 dispersed
Cam10g1233 Cam-Chr10:25737891 Cam10g1234 Cam-Chr10:25757074 2.90E-123 tandem
Cam10g1233 Cam-Chr10:25737891 Cam09g1929 Cam-Chr9:33982146 3.10E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1233 - - - 0.0